Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 TIMM8BP1-201ENST00000452384 211 ntBASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 PRYP6-201ENST00000514804 343 ntBASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 AC073439.1-201ENST00000624121 1774 ntBASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 AC211486.1-202ENST00000416371 468 ntBASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 AC093724.1-201ENST00000448659 1027 ntBASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 AC211476.1-201ENST00000503899 468 ntBASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 AC008267.7-201ENST00000624570 1194 ntBASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC148Q8NFR7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AC005052.1-201ENST00000625181 2492 ntBASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 MIR1233-2-201ENST00000408138 82 ntBASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 MIR1233-1-201ENST00000408722 82 ntBASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AC079140.1-201ENST00000508039 487 ntBASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 KRT8P48-201ENST00000515599 1220 ntBASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AC105233.2-201ENST00000523697 349 ntBASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AF228730.5-201ENST00000530288 346 ntBASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AC243562.1-201ENST00000560672 389 ntBASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 AC073389.1-201ENST00000595595 795 ntBASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC148Q8NFR7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms