Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 FAM86MP-201ENST00000340703 885 ntBASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 AC245100.3-201ENST00000441281 285 ntBASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 KRT223P-202ENST00000449164 1292 ntBASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 AC007389.4-201ENST00000454674 793 ntBASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 AC074044.1-201ENST00000609673 707 ntBASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 COX11-210ENST00000639671 696 ntBASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CARMIL3Q8ND23 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 AC234783.1-201ENST00000441761 496 ntBASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 BNIP3P42-201ENST00000454982 569 ntBASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 BNIP3P29-201ENST00000598302 571 ntBASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 AC011447.5-201ENST00000616168 564 ntBASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
CARMIL3Q8ND23 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CARMIL3Q8ND23 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CARMIL3Q8ND23 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.39■□□□□ 0.86
CARMIL3Q8ND23 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CARMIL3Q8ND23 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CARMIL3Q8ND23 AL031731.1-201ENST00000642131 2094 ntBASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CARMIL3Q8ND23 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CARMIL3Q8ND23 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CARMIL3Q8ND23 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CARMIL3Q8ND23 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CARMIL3Q8ND23 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CARMIL3Q8ND23 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms