Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 AC093724.1-201ENST00000448659 1027 ntBASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDRT4Q8N9R6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 MIR574-201ENST00000385209 96 ntBASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 MIR940-201ENST00000401276 94 ntBASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 AC002347.1-201ENST00000569543 541 ntBASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDRT4Q8N9R6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.27■□□□□ 0.03
CDRT4Q8N9R6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 AC018695.7-201ENST00000624587 2492 ntBASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CDRT4Q8N9R6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms