Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 BX842568.4-201ENST00000421222 227 ntBASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 ALG1L5P-201ENST00000482043 771 ntBASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 AC005622.1-201ENST00000636801 1703 ntBASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 CYP2T1P-202ENST00000641596 2535 ntBASIC16.86■□□□□ 0.29
ATPAF2Q8N5M1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 AKAP8P1-201ENST00000434743 1349 ntBASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.85■□□□□ 0.29
ATPAF2Q8N5M1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 AL671277.1-201ENST00000429656 993 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 HTR5BP-201ENST00000430851 1154 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 MKNK2P1-201ENST00000437526 628 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 ACTG1P14-201ENST00000446382 1122 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 RN7SL589P-201ENST00000481268 310 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 PRYP6-201ENST00000514804 343 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 FAM86C2P-203ENST00000528684 1004 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 AL135744.1-201ENST00000565098 629 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 MTHFR-217ENST00000641820 1569 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 AC073439.1-201ENST00000624121 1774 ntBASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms