Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LTBP4Q8N2S1 AC116353.5-201ENST00000638148 1699 ntBASIC22.22■■□□□ 1.15
LTBP4Q8N2S1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTBP4Q8N2S1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTBP4Q8N2S1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC22.22■■□□□ 1.15
LTBP4Q8N2S1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.22■■□□□ 1.15
LTBP4Q8N2S1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
LTBP4Q8N2S1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC22.21■■□□□ 1.15
LTBP4Q8N2S1 TUBB8P12-201ENST00000308911 1335 ntBASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 TUBB7P-202ENST00000428444 1305 ntBASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 TUBB8P7-204ENST00000567960 1332 ntBASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 USP40-206ENST00000443711 628 ntTSL 2 BASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC22.2■■□□□ 1.15
LTBP4Q8N2S1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 DNAJB1P1-201ENST00000429417 1024 ntBASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 AC244157.2-201ENST00000616239 1006 ntBASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.2■■□□□ 1.14
LTBP4Q8N2S1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 AC006453.1-201ENST00000636037 1257 ntBASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC22.19■■□□□ 1.14
LTBP4Q8N2S1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 KRT18P25-201ENST00000508931 1278 ntBASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 EIF5AP2-201ENST00000585668 1047 ntBASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 AC020922.3-201ENST00000595064 547 ntBASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 AP005019.2-201ENST00000615104 511 ntBASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 WIZP1-201ENST00000531444 2299 ntBASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 AC138028.4-201ENST00000564984 1845 ntBASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 AC133963.1-201ENST00000504166 1679 ntBASIC22.18■■□□□ 1.14
LTBP4Q8N2S1 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 KRT8P35-201ENST00000483942 1338 ntBASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 NDUFAB1P1-201ENST00000404262 460 ntBASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 AC011742.3-201ENST00000439053 820 ntBASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 AL157792.1-201ENST00000488281 530 ntBASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
LTBP4Q8N2S1 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms