Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 LETM1P2-201ENST00000597330 2178 ntBASIC22.34■■□□□ 1.17
XRN1Q8IZH2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 AC136604.1-201ENST00000418535 575 ntBASIC22.34■■□□□ 1.17
XRN1Q8IZH2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
XRN1Q8IZH2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 AC068880.1-201ENST00000507289 2297 ntBASIC22.33■■□□□ 1.17
XRN1Q8IZH2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 REXO1L8P-201ENST00000604378 1897 ntBASIC22.33■■□□□ 1.17
XRN1Q8IZH2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 USP40-206ENST00000443711 628 ntTSL 2 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
XRN1Q8IZH2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
XRN1Q8IZH2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
XRN1Q8IZH2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
XRN1Q8IZH2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
XRN1Q8IZH2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
XRN1Q8IZH2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 KC6-205ENST00000599934 556 ntTSL 4 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms