Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 FAM185BP-201ENST00000443595 716 ntBASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 AL513480.1-201ENST00000451731 511 ntBASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 UNC93B6-202ENST00000528242 690 ntBASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 PKD1P5-201ENST00000532415 10291 ntBASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00346Q8IVM7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 AC093909.1-201ENST00000504731 1122 ntBASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 AP001005.1-201ENST00000571755 1248 ntBASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 MIR4515-201ENST00000584082 81 ntBASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00346Q8IVM7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00346Q8IVM7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.58□□□□□ -0.07
LINC00346Q8IVM7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
LINC00346Q8IVM7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00346Q8IVM7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms