Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD1LQ86WJ1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 AC016027.1-202ENST00000607927 1699 ntBASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.29■□□□□ 0.84
CHD1LQ86WJ1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 AL121894.2-201ENST00000602977 491 ntBASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 CROCCP1-201ENST00000426910 5675 ntBASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD1LQ86WJ1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD1LQ86WJ1 KRT18P34-201ENST00000488218 1270 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms