Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC42BPAQ5VT25 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC24.39■■□□□ 1.49
CDC42BPAQ5VT25 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC42BPAQ5VT25 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CDC42BPAQ5VT25 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC24.39■■□□□ 1.49
CDC42BPAQ5VT25 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC42BPAQ5VT25 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 RPL7P3-201ENST00000441388 714 ntBASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 AC108725.1-201ENST00000495472 409 ntBASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 ELP6-209ENST00000446787 894 ntTSL 3 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 AL022328.1-201ENST00000610050 478 ntBASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CDC42BPAQ5VT25 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 USP40-206ENST00000443711 628 ntTSL 2 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 ZNF767P-206ENST00000513792 565 ntBASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 SLC25A47P1-201ENST00000531577 414 ntBASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 AC120498.9-201ENST00000339021 3867 ntBASIC24.37■■□□□ 1.49
CDC42BPAQ5VT25 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 AC012441.1-201ENST00000446669 685 ntBASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 AC000095.1-201ENST00000603208 874 ntBASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 AC009542.2-202ENST00000619004 1067 ntBASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 UBALD1-205ENST00000590891 2641 ntBASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 VILL-207ENST00000465644 1857 ntTSL 5 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC24.36■■□□□ 1.49
CDC42BPAQ5VT25 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 ACTG1P3-201ENST00000431775 1114 ntBASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 RNA5SP412-201ENST00000516234 123 ntBASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 RIT1-205ENST00000539040 919 ntTSL 2 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 BTNL10-201ENST00000595971 695 ntBASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms