Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 ACTG1P17-201ENST00000558391 1119 ntBASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 AC026954.1-201ENST00000429771 1293 ntBASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 AP001258.2-201ENST00000529891 490 ntBASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 UBALD1-205ENST00000590891 2641 ntBASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 LETM1P2-201ENST00000597330 2178 ntBASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 FXNP2-201ENST00000411625 547 ntBASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 AC007551.1-201ENST00000457394 519 ntBASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13DQ5THJ4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13DQ5THJ4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms