Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6AP1LQ52LC2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 AC136632.2-201ENST00000512891 861 ntBASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
ATP6AP1LQ52LC2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6AP1LQ52LC2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
ATP6AP1LQ52LC2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6AP1LQ52LC2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ATP6AP1LQ52LC2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6AP1LQ52LC2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms