Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 FAM86HP-204ENST00000513466 959 ntBASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC068587.3-201ENST00000526613 355 ntBASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 DUX4L45-201ENST00000566406 1057 ntBASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC008764.6-201ENST00000595909 2069 ntBASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 AC138028.4-201ENST00000564984 1845 ntBASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RSPO4Q2I0M5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 KRT18P55-202ENST00000578578 1546 ntBASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 AL442647.2-201ENST00000429864 857 ntBASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 FTH1P14-201ENST00000482930 551 ntBASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RSPO4Q2I0M5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms