Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
DDR1Q08345 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.14■□□□□ 0.82
DDR1Q08345 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.14■□□□□ 0.81
DDR1Q08345 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DDR1Q08345 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.14■□□□□ 0.81
DDR1Q08345 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
DDR1Q08345 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
DDR1Q08345 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 AZGP1P1-201ENST00000411909 902 ntBASIC20.14■□□□□ 0.81
DDR1Q08345 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.14■□□□□ 0.81
DDR1Q08345 FAM21FP-201ENST00000426241 1131 ntBASIC20.14■□□□□ 0.81
DDR1Q08345 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.14■□□□□ 0.81
DDR1Q08345 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 GOLGA2P4-201ENST00000441462 777 ntBASIC20.14■□□□□ 0.81
DDR1Q08345 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.14■□□□□ 0.81
DDR1Q08345 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.14■□□□□ 0.81
DDR1Q08345 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.14■□□□□ 0.81
DDR1Q08345 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.14■□□□□ 0.81
DDR1Q08345 AC124283.3-201ENST00000570869 594 ntBASIC20.14■□□□□ 0.81
DDR1Q08345 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
DDR1Q08345 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.14■□□□□ 0.81
DDR1Q08345 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.14■□□□□ 0.81
DDR1Q08345 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DDR1Q08345 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DDR1Q08345 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDR1Q08345 PP12613-201ENST00000424958 2230 ntBASIC20.14■□□□□ 0.81
DDR1Q08345 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DDR1Q08345 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.13■□□□□ 0.81
DDR1Q08345 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
DDR1Q08345 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.13■□□□□ 0.81
DDR1Q08345 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DDR1Q08345 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.13■□□□□ 0.81
DDR1Q08345 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
DDR1Q08345 FAM86LP-201ENST00000478302 853 ntBASIC20.13■□□□□ 0.81
DDR1Q08345 AC068587.3-201ENST00000526613 355 ntBASIC20.13■□□□□ 0.81
DDR1Q08345 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.13■□□□□ 0.81
DDR1Q08345 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.13■□□□□ 0.81
DDR1Q08345 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.13■□□□□ 0.81
DDR1Q08345 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.13■□□□□ 0.81
DDR1Q08345 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.13■□□□□ 0.81
DDR1Q08345 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
DDR1Q08345 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DDR1Q08345 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.13■□□□□ 0.81
DDR1Q08345 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.13■□□□□ 0.81
DDR1Q08345 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.13■□□□□ 0.81
DDR1Q08345 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDR1Q08345 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
DDR1Q08345 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDR1Q08345 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DDR1Q08345 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.12■□□□□ 0.81
DDR1Q08345 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDR1Q08345 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDR1Q08345 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDR1Q08345 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DDR1Q08345 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.12■□□□□ 0.81
DDR1Q08345 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDR1Q08345 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
DDR1Q08345 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.12■□□□□ 0.81
DDR1Q08345 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDR1Q08345 MIR1247-201ENST00000408206 136 ntBASIC20.12■□□□□ 0.81
DDR1Q08345 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.12■□□□□ 0.81
DDR1Q08345 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.12■□□□□ 0.81
DDR1Q08345 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.12■□□□□ 0.81
DDR1Q08345 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.12■□□□□ 0.81
DDR1Q08345 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDR1Q08345 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.12■□□□□ 0.81
DDR1Q08345 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.12■□□□□ 0.81
DDR1Q08345 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.12■□□□□ 0.81
DDR1Q08345 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.12■□□□□ 0.81
DDR1Q08345 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.12■□□□□ 0.81
DDR1Q08345 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms