Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.65■■□□□ 1.06
COL16A1Q07092 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
COL16A1Q07092 MIR6756-201ENST00000616240 63 ntBASIC21.65■■□□□ 1.06
COL16A1Q07092 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
COL16A1Q07092 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL16A1Q07092 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL16A1Q07092 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL16A1Q07092 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.64■■□□□ 1.06
COL16A1Q07092 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.64■■□□□ 1.06
COL16A1Q07092 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL16A1Q07092 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL16A1Q07092 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
COL16A1Q07092 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL16A1Q07092 AC234644.1-201ENST00000406065 370 ntBASIC21.64■■□□□ 1.05
COL16A1Q07092 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.64■■□□□ 1.05
COL16A1Q07092 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.64■■□□□ 1.05
COL16A1Q07092 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC21.64■■□□□ 1.05
COL16A1Q07092 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC21.64■■□□□ 1.05
COL16A1Q07092 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC21.64■■□□□ 1.05
COL16A1Q07092 AC006480.2-201ENST00000609770 1337 ntBASIC21.64■■□□□ 1.05
COL16A1Q07092 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
COL16A1Q07092 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL16A1Q07092 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL16A1Q07092 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
COL16A1Q07092 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.64■■□□□ 1.05
COL16A1Q07092 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL16A1Q07092 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL16A1Q07092 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL16A1Q07092 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL16A1Q07092 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC21.64■■□□□ 1.05
COL16A1Q07092 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC21.64■■□□□ 1.05
COL16A1Q07092 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL16A1Q07092 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL16A1Q07092 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL16A1Q07092 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC21.63■■□□□ 1.05
COL16A1Q07092 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC21.63■■□□□ 1.05
COL16A1Q07092 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.63■■□□□ 1.05
COL16A1Q07092 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL16A1Q07092 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC21.63■■□□□ 1.05
COL16A1Q07092 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
COL16A1Q07092 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL16A1Q07092 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.63■■□□□ 1.05
COL16A1Q07092 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
COL16A1Q07092 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL16A1Q07092 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL16A1Q07092 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL16A1Q07092 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL16A1Q07092 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
COL16A1Q07092 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC21.62■■□□□ 1.05
COL16A1Q07092 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC21.62■■□□□ 1.05
COL16A1Q07092 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC21.62■■□□□ 1.05
COL16A1Q07092 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COL16A1Q07092 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC21.62■■□□□ 1.05
COL16A1Q07092 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC21.62■■□□□ 1.05
COL16A1Q07092 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC21.62■■□□□ 1.05
COL16A1Q07092 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COL16A1Q07092 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.62■■□□□ 1.05
COL16A1Q07092 LINC02012-201ENST00000608206 1725 ntBASIC21.62■■□□□ 1.05
COL16A1Q07092 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.62■■□□□ 1.05
COL16A1Q07092 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 NKAIN1P1-201ENST00000435754 582 ntBASIC21.62■■□□□ 1.05
COL16A1Q07092 RN7SL11P-201ENST00000471305 293 ntBASIC21.62■■□□□ 1.05
COL16A1Q07092 NUP210P1-202ENST00000504322 710 ntBASIC21.62■■□□□ 1.05
COL16A1Q07092 AC026410.3-201ENST00000514280 936 ntBASIC21.62■■□□□ 1.05
COL16A1Q07092 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
COL16A1Q07092 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC21.62■■□□□ 1.05
COL16A1Q07092 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC21.62■■□□□ 1.05
COL16A1Q07092 AC006453.4-201ENST00000636949 1252 ntBASIC21.62■■□□□ 1.05
COL16A1Q07092 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL16A1Q07092 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL16A1Q07092 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL16A1Q07092 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COL16A1Q07092 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL16A1Q07092 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.61■■□□□ 1.05
COL16A1Q07092 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.61■■□□□ 1.05
COL16A1Q07092 AC008132.1-202ENST00000342005 1389 ntBASIC21.61■■□□□ 1.05
COL16A1Q07092 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.61■■□□□ 1.05
COL16A1Q07092 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL16A1Q07092 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COL16A1Q07092 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.61■■□□□ 1.05
COL16A1Q07092 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC21.61■■□□□ 1.05
COL16A1Q07092 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC21.61■■□□□ 1.05
COL16A1Q07092 SERPINA13P-202ENST00000478994 924 ntBASIC21.61■■□□□ 1.05
COL16A1Q07092 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.61■■□□□ 1.05
COL16A1Q07092 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.61■■□□□ 1.05
COL16A1Q07092 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL16A1Q07092 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL16A1Q07092 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms