Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
IRX4P78413 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.19■□□□□ 0.34
IRX4P78413 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
IRX4P78413 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
IRX4P78413 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
IRX4P78413 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.19■□□□□ 0.34
IRX4P78413 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
IRX4P78413 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.19■□□□□ 0.34
IRX4P78413 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 AC097637.2-201ENST00000624096 1997 ntBASIC17.19■□□□□ 0.34
IRX4P78413 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IRX4P78413 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.18■□□□□ 0.34
IRX4P78413 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.18■□□□□ 0.34
IRX4P78413 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
IRX4P78413 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IRX4P78413 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.18■□□□□ 0.34
IRX4P78413 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.18■□□□□ 0.34
IRX4P78413 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IRX4P78413 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.18■□□□□ 0.34
IRX4P78413 MIR4745-201ENST00000577608 62 ntBASIC17.18■□□□□ 0.34
IRX4P78413 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.18■□□□□ 0.34
IRX4P78413 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
IRX4P78413 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.18■□□□□ 0.34
IRX4P78413 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IRX4P78413 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
IRX4P78413 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
IRX4P78413 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.18■□□□□ 0.34
IRX4P78413 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
IRX4P78413 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IRX4P78413 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
IRX4P78413 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
IRX4P78413 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.17■□□□□ 0.34
IRX4P78413 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
IRX4P78413 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
IRX4P78413 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.17■□□□□ 0.34
IRX4P78413 MST1L-201ENST00000442552 2185 ntBASIC17.17■□□□□ 0.34
IRX4P78413 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.17■□□□□ 0.34
IRX4P78413 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
IRX4P78413 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.17■□□□□ 0.34
IRX4P78413 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.17■□□□□ 0.34
IRX4P78413 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.17■□□□□ 0.34
IRX4P78413 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
IRX4P78413 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
IRX4P78413 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
IRX4P78413 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.17■□□□□ 0.34
IRX4P78413 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IRX4P78413 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IRX4P78413 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.16■□□□□ 0.34
IRX4P78413 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.16■□□□□ 0.34
IRX4P78413 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.16■□□□□ 0.34
IRX4P78413 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms