Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
AP3S2P59780 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S2P59780 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
AP3S2P59780 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.17□□□□□ -0.14
AP3S2P59780 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
AP3S2P59780 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.17□□□□□ -0.14
AP3S2P59780 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
AP3S2P59780 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
AP3S2P59780 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 PCGF3-213ENST00000620529 1899 ntBASIC14.17□□□□□ -0.14
AP3S2P59780 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S2P59780 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S2P59780 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 AC026396.1-201ENST00000419388 421 ntBASIC14.17□□□□□ -0.14
AP3S2P59780 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.17□□□□□ -0.14
AP3S2P59780 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S2P59780 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S2P59780 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.17□□□□□ -0.14
AP3S2P59780 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S2P59780 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
AP3S2P59780 AL031731.1-201ENST00000642131 2094 ntBASIC14.17□□□□□ -0.14
AP3S2P59780 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S2P59780 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S2P59780 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
AP3S2P59780 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.17□□□□□ -0.14
AP3S2P59780 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.17□□□□□ -0.14
AP3S2P59780 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
AP3S2P59780 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP3S2P59780 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.16□□□□□ -0.14
AP3S2P59780 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
AP3S2P59780 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.16□□□□□ -0.14
AP3S2P59780 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP3S2P59780 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.16□□□□□ -0.14
AP3S2P59780 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.16□□□□□ -0.14
AP3S2P59780 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP3S2P59780 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.16□□□□□ -0.14
AP3S2P59780 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.16□□□□□ -0.14
AP3S2P59780 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 LINC01101-201ENST00000622953 1884 ntBASIC14.16□□□□□ -0.14
AP3S2P59780 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 AC087386.2-201ENST00000623212 4637 ntBASIC14.16□□□□□ -0.14
AP3S2P59780 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP3S2P59780 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S2P59780 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms