Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 AL355877.3-201ENST00000622820 899 ntBASIC15.21■□□□□ 0.03
SMIM11AP58511 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.21■□□□□ 0.03
SMIM11AP58511 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SMIM11AP58511 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.21■□□□□ 0.03
SMIM11AP58511 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SMIM11AP58511 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.21■□□□□ 0.03
SMIM11AP58511 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.21■□□□□ 0.02
SMIM11AP58511 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMIM11AP58511 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SMIM11AP58511 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMIM11AP58511 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SMIM11AP58511 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMIM11AP58511 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMIM11AP58511 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.2■□□□□ 0.02
SMIM11AP58511 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.2■□□□□ 0.02
SMIM11AP58511 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.2■□□□□ 0.02
SMIM11AP58511 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SMIM11AP58511 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SMIM11AP58511 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 SLC25A6P2-201ENST00000497974 877 ntBASIC15.2■□□□□ 0.02
SMIM11AP58511 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SMIM11AP58511 AC091076.1-201ENST00000610741 619 ntBASIC15.2■□□□□ 0.02
SMIM11AP58511 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.2■□□□□ 0.02
SMIM11AP58511 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.2■□□□□ 0.02
SMIM11AP58511 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.2■□□□□ 0.02
SMIM11AP58511 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.2■□□□□ 0.02
SMIM11AP58511 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.2■□□□□ 0.02
SMIM11AP58511 AC112504.1-201ENST00000623415 1841 ntBASIC15.2■□□□□ 0.02
SMIM11AP58511 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMIM11AP58511 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SMIM11AP58511 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM11AP58511 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM11AP58511 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SMIM11AP58511 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SMIM11AP58511 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.19■□□□□ 0.02
SMIM11AP58511 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.19■□□□□ 0.02
SMIM11AP58511 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SMIM11AP58511 AC006557.2-201ENST00000592985 1240 ntBASIC15.19■□□□□ 0.02
SMIM11AP58511 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.19■□□□□ 0.02
SMIM11AP58511 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
SMIM11AP58511 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SMIM11AP58511 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SMIM11AP58511 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM11AP58511 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM11AP58511 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SMIM11AP58511 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.19■□□□□ 0.02
SMIM11AP58511 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SMIM11AP58511 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SMIM11AP58511 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.19■□□□□ 0.02
SMIM11AP58511 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMIM11AP58511 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms