Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 YBX1P6-201ENST00000442962 1002 ntBASIC13.68□□□□□ -0.22
RIPPLY3P57055 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 CTBP2P3-201ENST00000585629 1255 ntBASIC13.68□□□□□ -0.22
RIPPLY3P57055 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 AC010328.2-201ENST00000597698 1111 ntBASIC13.68□□□□□ -0.22
RIPPLY3P57055 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.68□□□□□ -0.22
RIPPLY3P57055 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 AL136379.1-201ENST00000623471 2642 ntBASIC13.67□□□□□ -0.22
RIPPLY3P57055 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 AC123567.1-201ENST00000548294 1261 ntBASIC13.67□□□□□ -0.22
RIPPLY3P57055 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RIPPLY3P57055 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIPPLY3P57055 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 WASH6P-202ENST00000359512 1437 ntBASIC13.66□□□□□ -0.22
RIPPLY3P57055 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.66□□□□□ -0.22
RIPPLY3P57055 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIPPLY3P57055 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms