Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLDN20P56880 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN20P56880 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN20P56880 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN20P56880 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CLDN20P56880 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN20P56880 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.11■□□□□ 0.01
CLDN20P56880 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN20P56880 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN20P56880 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN20P56880 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN20P56880 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN20P56880 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 HTR5BP-201ENST00000430851 1154 ntBASIC15.11■□□□□ 0.01
CLDN20P56880 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN20P56880 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLDN20P56880 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.11■□□□□ 0.01
CLDN20P56880 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.11■□□□□ 0.01
CLDN20P56880 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
CLDN20P56880 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.11■□□□□ 0.01
CLDN20P56880 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN20P56880 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN20P56880 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN20P56880 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN20P56880 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN20P56880 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN20P56880 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN20P56880 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLDN20P56880 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN20P56880 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CLDN20P56880 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN20P56880 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN20P56880 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLDN20P56880 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLDN20P56880 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.1■□□□□ 0.01
CLDN20P56880 AC140658.5-201ENST00000438532 169 ntBASIC15.1■□□□□ 0.01
CLDN20P56880 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN20P56880 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN20P56880 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLDN20P56880 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN20P56880 CYP2A7P1-201ENST00000595391 815 ntBASIC15.1■□□□□ 0.01
CLDN20P56880 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN20P56880 GPALPP1-207ENST00000611650 899 ntBASIC15.1■□□□□ 0.01
CLDN20P56880 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN20P56880 AC079328.2-201ENST00000561241 3354 ntBASIC15.1■□□□□ 0.01
CLDN20P56880 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLDN20P56880 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLDN20P56880 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 AL645728.1-201ENST00000366221 2101 ntBASIC15.1■□□□□ 0.01
CLDN20P56880 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLDN20P56880 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms