Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN6P56747 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CLDN6P56747 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLDN6P56747 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN6P56747 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 MYCLP2-201ENST00000449268 967 ntBASIC15.73■□□□□ 0.11
CLDN6P56747 AC093004.1-201ENST00000508850 424 ntBASIC15.73■□□□□ 0.11
CLDN6P56747 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN6P56747 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
CLDN6P56747 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN6P56747 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN6P56747 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CLDN6P56747 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN6P56747 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN6P56747 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 BTBD7P1-201ENST00000447253 1453 ntBASIC15.72■□□□□ 0.11
CLDN6P56747 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.72■□□□□ 0.11
CLDN6P56747 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CLDN6P56747 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.72■□□□□ 0.11
CLDN6P56747 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLDN6P56747 CROCCP4-201ENST00000457096 498 ntBASIC15.72■□□□□ 0.11
CLDN6P56747 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLDN6P56747 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 ELK1P1-201ENST00000485699 580 ntBASIC15.72■□□□□ 0.11
CLDN6P56747 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.72■□□□□ 0.11
CLDN6P56747 AC004461.2-201ENST00000629517 803 ntBASIC15.72■□□□□ 0.11
CLDN6P56747 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CLDN6P56747 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN6P56747 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CLDN6P56747 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CLDN6P56747 AL391825.1-201ENST00000457671 1364 ntBASIC15.72■□□□□ 0.11
CLDN6P56747 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN6P56747 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLDN6P56747 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN6P56747 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN6P56747 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN6P56747 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CLDN6P56747 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CLDN6P56747 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLDN6P56747 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN6P56747 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLDN6P56747 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN6P56747 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN6P56747 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLDN6P56747 TPRX2P-201ENST00000535362 881 ntBASIC15.71■□□□□ 0.11
CLDN6P56747 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN6P56747 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN6P56747 SRD5A3P1-201ENST00000603021 949 ntBASIC15.71■□□□□ 0.11
CLDN6P56747 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CLDN6P56747 AL109936.8-201ENST00000641772 604 ntBASIC15.71■□□□□ 0.11
CLDN6P56747 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CLDN6P56747 AC139713.2-201ENST00000641328 2723 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms