Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA4P54764 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA4P54764 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 TERF1P3-201ENST00000505638 1227 ntBASIC15.79■□□□□ 0.12
EPHA4P54764 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
EPHA4P54764 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.79■□□□□ 0.12
EPHA4P54764 AC138761.1-201ENST00000584393 385 ntBASIC15.79■□□□□ 0.12
EPHA4P54764 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.79■□□□□ 0.12
EPHA4P54764 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA4P54764 AC026979.3-201ENST00000607315 403 ntBASIC15.79■□□□□ 0.12
EPHA4P54764 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA4P54764 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 AC018695.7-201ENST00000624587 2492 ntBASIC15.79■□□□□ 0.12
EPHA4P54764 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA4P54764 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA4P54764 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 AC105020.1-201ENST00000435356 2205 ntBASIC15.79■□□□□ 0.12
EPHA4P54764 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 MST1L-201ENST00000442552 2185 ntBASIC15.79■□□□□ 0.12
EPHA4P54764 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
EPHA4P54764 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHA4P54764 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHA4P54764 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHA4P54764 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA4P54764 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.78■□□□□ 0.12
EPHA4P54764 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.78■□□□□ 0.12
EPHA4P54764 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.78■□□□□ 0.12
EPHA4P54764 AL035633.1-201ENST00000406139 838 ntBASIC15.78■□□□□ 0.12
EPHA4P54764 TSSK5P-201ENST00000423978 907 ntBASIC15.78■□□□□ 0.12
EPHA4P54764 AC002472.2-201ENST00000442739 958 ntBASIC15.78■□□□□ 0.12
EPHA4P54764 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.78■□□□□ 0.12
EPHA4P54764 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
EPHA4P54764 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA4P54764 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.78■□□□□ 0.12
EPHA4P54764 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.78■□□□□ 0.12
EPHA4P54764 AC061975.2-201ENST00000581722 295 ntBASIC15.78■□□□□ 0.12
EPHA4P54764 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
EPHA4P54764 AL589739.1-201ENST00000607720 493 ntBASIC15.78■□□□□ 0.12
EPHA4P54764 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
EPHA4P54764 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA4P54764 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
EPHA4P54764 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EPHA4P54764 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHA4P54764 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA4P54764 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.77■□□□□ 0.12
EPHA4P54764 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
EPHA4P54764 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA4P54764 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHA4P54764 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
EPHA4P54764 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
EPHA4P54764 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
EPHA4P54764 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.77■□□□□ 0.12
EPHA4P54764 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
EPHA4P54764 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms