Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 AC124067.4-201ENST00000519691 2379 ntBASIC14.22□□□□□ -0.13
HCFC1P51610 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HCFC1P51610 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HCFC1P51610 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 AL589987.1-201ENST00000453380 819 ntBASIC14.22□□□□□ -0.13
HCFC1P51610 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.22□□□□□ -0.13
HCFC1P51610 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.22□□□□□ -0.13
HCFC1P51610 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.22□□□□□ -0.13
HCFC1P51610 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HCFC1P51610 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCFC1P51610 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.21□□□□□ -0.13
HCFC1P51610 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.21□□□□□ -0.13
HCFC1P51610 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.21□□□□□ -0.13
HCFC1P51610 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HCFC1P51610 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 AC092068.3-201ENST00000587894 2016 ntBASIC14.21□□□□□ -0.13
HCFC1P51610 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
HCFC1P51610 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HCFC1P51610 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 AC234783.1-201ENST00000441761 496 ntBASIC14.21□□□□□ -0.13
HCFC1P51610 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.21□□□□□ -0.13
HCFC1P51610 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.21□□□□□ -0.13
HCFC1P51610 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.21□□□□□ -0.13
HCFC1P51610 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HCFC1P51610 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 CLK3P2-201ENST00000427566 1453 ntBASIC14.21□□□□□ -0.13
HCFC1P51610 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HCFC1P51610 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCFC1P51610 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.21□□□□□ -0.13
HCFC1P51610 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HCFC1P51610 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HCFC1P51610 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
HCFC1P51610 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HCFC1P51610 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HCFC1P51610 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.21□□□□□ -0.14
HCFC1P51610 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HCFC1P51610 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HCFC1P51610 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HCFC1P51610 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 AC087499.6-201ENST00000411576 835 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 KRT223P-202ENST00000449164 1292 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.2□□□□□ -0.14
HCFC1P51610 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.2□□□□□ -0.14
HCFC1P51610 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.2□□□□□ -0.14
HCFC1P51610 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.2□□□□□ -0.14
HCFC1P51610 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.2□□□□□ -0.14
HCFC1P51610 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
HCFC1P51610 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.2□□□□□ -0.14
HCFC1P51610 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.2□□□□□ -0.14
HCFC1P51610 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.2□□□□□ -0.14
HCFC1P51610 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HCFC1P51610 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 AC060834.1-201ENST00000443027 2032 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 PCDHB17P-201ENST00000539533 2393 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms