Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.24■□□□□ 0.51
CENPFP49454 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CENPFP49454 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.23■□□□□ 0.51
CENPFP49454 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.23■□□□□ 0.51
CENPFP49454 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.23■□□□□ 0.51
CENPFP49454 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.23■□□□□ 0.51
CENPFP49454 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.23■□□□□ 0.51
CENPFP49454 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.23■□□□□ 0.51
CENPFP49454 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.23■□□□□ 0.51
CENPFP49454 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 AC018695.7-201ENST00000624587 2492 ntBASIC18.23■□□□□ 0.51
CENPFP49454 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CENPFP49454 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.23■□□□□ 0.51
CENPFP49454 HIST3H2BA-201ENST00000436555 524 ntBASIC18.23■□□□□ 0.51
CENPFP49454 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 AKR7A2P1-201ENST00000460134 915 ntBASIC18.23■□□□□ 0.51
CENPFP49454 AC091804.1-201ENST00000486888 567 ntBASIC18.23■□□□□ 0.51
CENPFP49454 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
CENPFP49454 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.23■□□□□ 0.51
CENPFP49454 AL008638.5-201ENST00000623814 1298 ntBASIC18.23■□□□□ 0.51
CENPFP49454 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CENPFP49454 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CENPFP49454 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.23■□□□□ 0.51
CENPFP49454 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.23■□□□□ 0.51
CENPFP49454 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CENPFP49454 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.23■□□□□ 0.51
CENPFP49454 LINC01115-203ENST00000606068 577 ntBASIC18.23■□□□□ 0.51
CENPFP49454 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.22■□□□□ 0.51
CENPFP49454 AC009053.2-201ENST00000563701 2365 ntBASIC18.22■□□□□ 0.51
CENPFP49454 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.22■□□□□ 0.51
CENPFP49454 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 ACTG1P3-201ENST00000431775 1114 ntBASIC18.22■□□□□ 0.51
CENPFP49454 RN7SL769P-201ENST00000469386 295 ntBASIC18.22■□□□□ 0.51
CENPFP49454 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.22■□□□□ 0.51
CENPFP49454 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.22■□□□□ 0.51
CENPFP49454 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.22■□□□□ 0.51
CENPFP49454 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.22■□□□□ 0.51
CENPFP49454 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.22■□□□□ 0.51
CENPFP49454 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CENPFP49454 NUS1P3-201ENST00000423502 862 ntBASIC18.22■□□□□ 0.51
CENPFP49454 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.22■□□□□ 0.51
CENPFP49454 TMEM198B-204ENST00000484016 896 ntBASIC18.22■□□□□ 0.51
CENPFP49454 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.22■□□□□ 0.51
CENPFP49454 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.22■□□□□ 0.51
CENPFP49454 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.22■□□□□ 0.51
CENPFP49454 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 AL603756.1-201ENST00000606511 2163 ntBASIC18.22■□□□□ 0.51
CENPFP49454 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.22■□□□□ 0.51
CENPFP49454 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CENPFP49454 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CENPFP49454 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.21■□□□□ 0.51
CENPFP49454 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.21■□□□□ 0.51
CENPFP49454 AC004898.1-201ENST00000451057 766 ntBASIC18.21■□□□□ 0.51
CENPFP49454 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.21■□□□□ 0.51
CENPFP49454 MIR3619-201ENST00000579667 83 ntBASIC18.21■□□□□ 0.51
CENPFP49454 AC008687.7-202ENST00000637404 953 ntBASIC18.21■□□□□ 0.51
CENPFP49454 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.21■□□□□ 0.51
CENPFP49454 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CENPFP49454 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 AL138781.2-201ENST00000617896 1843 ntBASIC18.21■□□□□ 0.51
CENPFP49454 MIR326-201ENST00000362220 95 ntBASIC18.21■□□□□ 0.51
CENPFP49454 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 EIF4HP1-201ENST00000453115 687 ntBASIC18.21■□□□□ 0.51
CENPFP49454 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.21■□□□□ 0.51
CENPFP49454 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.21■□□□□ 0.51
CENPFP49454 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CENPFP49454 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.21■□□□□ 0.51
CENPFP49454 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CENPFP49454 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CENPFP49454 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.21■□□□□ 0.51
CENPFP49454 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.21■□□□□ 0.51
CENPFP49454 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CENPFP49454 AC138028.6-201ENST00000616106 1482 ntBASIC18.2■□□□□ 0.5
CENPFP49454 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms