Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNNI2P48788 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNNI2P48788 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TNNI2P48788 AC114501.2-201ENST00000439631 535 ntBASIC19.44■□□□□ 0.7
TNNI2P48788 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.44■□□□□ 0.7
TNNI2P48788 INE1-201ENST00000456273 945 ntBASIC19.44■□□□□ 0.7
TNNI2P48788 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.44■□□□□ 0.7
TNNI2P48788 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.44■□□□□ 0.7
TNNI2P48788 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.44■□□□□ 0.7
TNNI2P48788 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.44■□□□□ 0.7
TNNI2P48788 AC061975.2-201ENST00000581722 295 ntBASIC19.44■□□□□ 0.7
TNNI2P48788 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.44■□□□□ 0.7
TNNI2P48788 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNNI2P48788 AL033527.5-202ENST00000641632 1098 ntBASIC19.44■□□□□ 0.7
TNNI2P48788 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TNNI2P48788 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNNI2P48788 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.44■□□□□ 0.7
TNNI2P48788 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TNNI2P48788 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.44■□□□□ 0.7
TNNI2P48788 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TNNI2P48788 AC060834.1-201ENST00000443027 2032 ntBASIC19.44■□□□□ 0.7
TNNI2P48788 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNNI2P48788 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNNI2P48788 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNNI2P48788 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNNI2P48788 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.43■□□□□ 0.7
TNNI2P48788 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.43■□□□□ 0.7
TNNI2P48788 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.43■□□□□ 0.7
TNNI2P48788 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TNNI2P48788 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.43■□□□□ 0.7
TNNI2P48788 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.43■□□□□ 0.7
TNNI2P48788 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.43■□□□□ 0.7
TNNI2P48788 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.43■□□□□ 0.7
TNNI2P48788 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.43■□□□□ 0.7
TNNI2P48788 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.43■□□□□ 0.7
TNNI2P48788 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.43■□□□□ 0.7
TNNI2P48788 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 OR6D1P-203ENST00000641209 4860 ntBASIC19.43■□□□□ 0.7
TNNI2P48788 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.43■□□□□ 0.7
TNNI2P48788 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.43■□□□□ 0.7
TNNI2P48788 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNNI2P48788 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TNNI2P48788 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.43■□□□□ 0.7
TNNI2P48788 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TNNI2P48788 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
TNNI2P48788 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.42■□□□□ 0.7
TNNI2P48788 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 AL512384.1-201ENST00000406683 331 ntBASIC19.42■□□□□ 0.7
TNNI2P48788 SPDYE17-201ENST00000412399 783 ntBASIC19.42■□□□□ 0.7
TNNI2P48788 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TNNI2P48788 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 SDHAP3-202ENST00000515467 728 ntBASIC19.42■□□□□ 0.7
TNNI2P48788 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.42■□□□□ 0.7
TNNI2P48788 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TNNI2P48788 AC055876.2-201ENST00000531834 546 ntBASIC19.42■□□□□ 0.7
TNNI2P48788 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.42■□□□□ 0.7
TNNI2P48788 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.42■□□□□ 0.7
TNNI2P48788 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.42■□□□□ 0.7
TNNI2P48788 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.42■□□□□ 0.7
TNNI2P48788 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.42■□□□□ 0.7
TNNI2P48788 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TNNI2P48788 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TNNI2P48788 AC008494.3-201ENST00000606615 944 ntBASIC19.42■□□□□ 0.7
TNNI2P48788 IGHV3-72-202ENST00000621503 303 ntBASIC19.42■□□□□ 0.7
TNNI2P48788 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.42■□□□□ 0.7
TNNI2P48788 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.42■□□□□ 0.7
TNNI2P48788 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TNNI2P48788 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNNI2P48788 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.41■□□□□ 0.7
TNNI2P48788 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNNI2P48788 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNNI2P48788 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.41■□□□□ 0.7
TNNI2P48788 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNNI2P48788 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNNI2P48788 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TNNI2P48788 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms