Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 AC004832.2-201ENST00000426397 482 ntBASIC15.83■□□□□ 0.12
SLC6A12P48065 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 FAM58CP-201ENST00000435741 640 ntBASIC15.83■□□□□ 0.12
SLC6A12P48065 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
SLC6A12P48065 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC6A12P48065 AL138918.1-201ENST00000568306 659 ntBASIC15.83■□□□□ 0.12
SLC6A12P48065 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC6A12P48065 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC6A12P48065 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC6A12P48065 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 PMS2P7-201ENST00000506558 1336 ntBASIC15.83■□□□□ 0.12
SLC6A12P48065 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
SLC6A12P48065 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC6A12P48065 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A12P48065 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC6A12P48065 LINC02447-202ENST00000501888 2146 ntBASIC15.83■□□□□ 0.12
SLC6A12P48065 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A12P48065 AC008677.1-201ENST00000519230 1561 ntBASIC15.83■□□□□ 0.12
SLC6A12P48065 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.83■□□□□ 0.12
SLC6A12P48065 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SLC6A12P48065 AC112504.1-201ENST00000623415 1841 ntBASIC15.82■□□□□ 0.12
SLC6A12P48065 AC010491.1-201ENST00000563101 2797 ntBASIC15.82■□□□□ 0.12
SLC6A12P48065 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC6A12P48065 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SLC6A12P48065 AC245100.5-201ENST00000452108 331 ntBASIC15.82■□□□□ 0.12
SLC6A12P48065 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC6A12P48065 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC6A12P48065 AL135744.1-201ENST00000565098 629 ntBASIC15.82■□□□□ 0.12
SLC6A12P48065 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC6A12P48065 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC6A12P48065 AL365330.1-201ENST00000607459 531 ntBASIC15.82■□□□□ 0.12
SLC6A12P48065 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC6A12P48065 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SLC6A12P48065 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
SLC6A12P48065 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SLC6A12P48065 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A12P48065 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SLC6A12P48065 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
SLC6A12P48065 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A12P48065 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A12P48065 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A12P48065 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A12P48065 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC6A12P48065 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SLC6A12P48065 TFAMP1-201ENST00000412727 736 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms