Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL12P48061 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL12P48061 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CXCL12P48061 CROCCP2-202ENST00000412962 2773 ntBASIC16.2■□□□□ 0.18
CXCL12P48061 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL12P48061 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL12P48061 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.2■□□□□ 0.18
CXCL12P48061 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL12P48061 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.2■□□□□ 0.18
CXCL12P48061 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CXCL12P48061 AC099336.1-201ENST00000417053 1171 ntBASIC16.2■□□□□ 0.18
CXCL12P48061 FAM21FP-201ENST00000426241 1131 ntBASIC16.2■□□□□ 0.18
CXCL12P48061 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.2■□□□□ 0.18
CXCL12P48061 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.2■□□□□ 0.18
CXCL12P48061 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.2■□□□□ 0.18
CXCL12P48061 AC103810.3-201ENST00000583567 96 ntBASIC16.2■□□□□ 0.18
CXCL12P48061 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.2■□□□□ 0.18
CXCL12P48061 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.2■□□□□ 0.18
CXCL12P48061 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.2■□□□□ 0.18
CXCL12P48061 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.2■□□□□ 0.18
CXCL12P48061 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL12P48061 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CXCL12P48061 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CXCL12P48061 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL12P48061 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CXCL12P48061 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CXCL12P48061 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL12P48061 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
CXCL12P48061 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CXCL12P48061 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCL12P48061 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.19■□□□□ 0.18
CXCL12P48061 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.19■□□□□ 0.18
CXCL12P48061 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CXCL12P48061 AC134043.2-201ENST00000624206 2238 ntBASIC16.19■□□□□ 0.18
CXCL12P48061 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CXCL12P48061 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CXCL12P48061 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.19■□□□□ 0.18
CXCL12P48061 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.19■□□□□ 0.18
CXCL12P48061 CYP4F24P-201ENST00000586049 1580 ntBASIC16.19■□□□□ 0.18
CXCL12P48061 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CXCL12P48061 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.19■□□□□ 0.18
CXCL12P48061 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CXCL12P48061 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CXCL12P48061 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.19■□□□□ 0.18
CXCL12P48061 CSF2RBP1-201ENST00000447905 391 ntBASIC16.19■□□□□ 0.18
CXCL12P48061 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.19■□□□□ 0.18
CXCL12P48061 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.19■□□□□ 0.18
CXCL12P48061 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.19■□□□□ 0.18
CXCL12P48061 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.19■□□□□ 0.18
CXCL12P48061 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CXCL12P48061 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CXCL12P48061 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
CXCL12P48061 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCL12P48061 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.18■□□□□ 0.18
CXCL12P48061 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CXCL12P48061 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL12P48061 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCL12P48061 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CXCL12P48061 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CXCL12P48061 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CXCL12P48061 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL12P48061 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CXCL12P48061 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CXCL12P48061 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CXCL12P48061 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.18■□□□□ 0.18
CXCL12P48061 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CXCL12P48061 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL12P48061 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL12P48061 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.18■□□□□ 0.18
CXCL12P48061 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCL12P48061 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.18■□□□□ 0.18
CXCL12P48061 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.18■□□□□ 0.18
CXCL12P48061 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.18■□□□□ 0.18
CXCL12P48061 FO681548.1-201ENST00000455617 1132 ntBASIC16.18■□□□□ 0.18
CXCL12P48061 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.18■□□□□ 0.18
CXCL12P48061 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCL12P48061 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCL12P48061 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms