Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 AC092364.2-201ENST00000596710 2692 ntBASIC14.86□□□□□ -0.03
APOBEC1P41238 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.86□□□□□ -0.03
APOBEC1P41238 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.86□□□□□ -0.03
APOBEC1P41238 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.86□□□□□ -0.03
APOBEC1P41238 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
APOBEC1P41238 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
APOBEC1P41238 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.86□□□□□ -0.03
APOBEC1P41238 AC026120.1-201ENST00000611536 926 ntBASIC14.86□□□□□ -0.03
APOBEC1P41238 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
APOBEC1P41238 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.86□□□□□ -0.03
APOBEC1P41238 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 AL662844.4-201ENST00000606367 2838 ntBASIC14.86□□□□□ -0.03
APOBEC1P41238 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APOBEC1P41238 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOBEC1P41238 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 AC079328.2-201ENST00000561241 3354 ntBASIC14.85□□□□□ -0.03
APOBEC1P41238 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.85□□□□□ -0.03
APOBEC1P41238 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
APOBEC1P41238 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
APOBEC1P41238 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
APOBEC1P41238 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.85□□□□□ -0.03
APOBEC1P41238 BX842568.4-201ENST00000421222 227 ntBASIC14.85□□□□□ -0.03
APOBEC1P41238 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.85□□□□□ -0.03
APOBEC1P41238 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 SPDYE11-202ENST00000450699 704 ntBASIC14.85□□□□□ -0.03
APOBEC1P41238 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.85□□□□□ -0.03
APOBEC1P41238 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.85□□□□□ -0.03
APOBEC1P41238 SPDYE9P-201ENST00000570642 692 ntBASIC14.85□□□□□ -0.03
APOBEC1P41238 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.85□□□□□ -0.03
APOBEC1P41238 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
APOBEC1P41238 SPDYE10P-202ENST00000612005 668 ntBASIC14.85□□□□□ -0.03
APOBEC1P41238 SPDYE8P-202ENST00000612377 668 ntBASIC14.85□□□□□ -0.03
APOBEC1P41238 AC008267.7-201ENST00000624570 1194 ntBASIC14.85□□□□□ -0.03
APOBEC1P41238 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.85□□□□□ -0.03
APOBEC1P41238 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.85□□□□□ -0.03
APOBEC1P41238 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.85□□□□□ -0.03
APOBEC1P41238 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.85□□□□□ -0.03
APOBEC1P41238 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOBEC1P41238 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms