Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN1P35523 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCN1P35523 AC109462.3-201ENST00000573934 613 ntBASIC18.77■□□□□ 0.6
CLCN1P35523 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.77■□□□□ 0.6
CLCN1P35523 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CLCN1P35523 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.77■□□□□ 0.6
CLCN1P35523 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLCN1P35523 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.77■□□□□ 0.59
CLCN1P35523 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.77■□□□□ 0.59
CLCN1P35523 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLCN1P35523 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLCN1P35523 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.77■□□□□ 0.59
CLCN1P35523 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 PRAL-201ENST00000624952 3286 ntBASIC18.76■□□□□ 0.59
CLCN1P35523 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 MIR1224-201ENST00000408193 85 ntBASIC18.76■□□□□ 0.59
CLCN1P35523 TOB2P1-201ENST00000469761 992 ntBASIC18.76■□□□□ 0.59
CLCN1P35523 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.76■□□□□ 0.59
CLCN1P35523 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 AP002490.2-201ENST00000524791 560 ntBASIC18.76■□□□□ 0.59
CLCN1P35523 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 NIFKP4-201ENST00000567275 1192 ntBASIC18.76■□□□□ 0.59
CLCN1P35523 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CLCN1P35523 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCN1P35523 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCN1P35523 AC136621.1-201ENST00000624017 2304 ntBASIC18.75■□□□□ 0.59
CLCN1P35523 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN1P35523 AC232323.1-201ENST00000540724 2099 ntBASIC18.75■□□□□ 0.59
CLCN1P35523 REXO1L5P-201ENST00000622260 2098 ntBASIC18.75■□□□□ 0.59
CLCN1P35523 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN1P35523 AC007686.3-201ENST00000619017 3487 ntBASIC18.75■□□□□ 0.59
CLCN1P35523 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLCN1P35523 AC112504.1-201ENST00000623415 1841 ntBASIC18.75■□□□□ 0.59
CLCN1P35523 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLCN1P35523 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 FAM220CP-201ENST00000395253 831 ntBASIC18.75■□□□□ 0.59
CLCN1P35523 IGHV3-47-201ENST00000425060 335 ntBASIC18.75■□□□□ 0.59
CLCN1P35523 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 AC009533.2-201ENST00000543664 586 ntBASIC18.75■□□□□ 0.59
CLCN1P35523 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN1P35523 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.75■□□□□ 0.59
CLCN1P35523 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLCN1P35523 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN1P35523 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CLCN1P35523 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.75■□□□□ 0.59
CLCN1P35523 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCN1P35523 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCN1P35523 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLCN1P35523 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCN1P35523 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms