Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.1■□□□□ 0.97
RXRBP28702 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RXRBP28702 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.1■□□□□ 0.97
RXRBP28702 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC21.1■□□□□ 0.97
RXRBP28702 AC074338.1-201ENST00000416825 156 ntBASIC21.1■□□□□ 0.97
RXRBP28702 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 RNA5SP486-201ENST00000515961 83 ntBASIC21.1■□□□□ 0.97
RXRBP28702 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC21.1■□□□□ 0.97
RXRBP28702 AC013467.2-201ENST00000605472 835 ntBASIC21.1■□□□□ 0.97
RXRBP28702 AP001527.2-201ENST00000614441 631 ntBASIC21.1■□□□□ 0.97
RXRBP28702 AL136301.1-201ENST00000615830 422 ntBASIC21.1■□□□□ 0.97
RXRBP28702 AC145423.3-201ENST00000615987 467 ntBASIC21.1■□□□□ 0.97
RXRBP28702 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.1■□□□□ 0.97
RXRBP28702 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC21.1■□□□□ 0.97
RXRBP28702 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.1■□□□□ 0.97
RXRBP28702 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RXRBP28702 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRBP28702 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RXRBP28702 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RXRBP28702 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRBP28702 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RXRBP28702 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RXRBP28702 HNRNPA1P63-201ENST00000427917 963 ntBASIC21.09■□□□□ 0.97
RXRBP28702 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC21.09■□□□□ 0.97
RXRBP28702 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC21.09■□□□□ 0.97
RXRBP28702 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RXRBP28702 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.09■□□□□ 0.97
RXRBP28702 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.09■□□□□ 0.97
RXRBP28702 AP001065.2-201ENST00000617205 644 ntBASIC21.09■□□□□ 0.97
RXRBP28702 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC21.09■□□□□ 0.97
RXRBP28702 AL139011.1-202ENST00000642063 584 ntBASIC21.09■□□□□ 0.97
RXRBP28702 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RXRBP28702 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RXRBP28702 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RXRBP28702 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RXRBP28702 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RXRBP28702 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RXRBP28702 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RXRBP28702 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.08■□□□□ 0.97
RXRBP28702 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RXRBP28702 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RXRBP28702 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.08■□□□□ 0.97
RXRBP28702 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRBP28702 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRBP28702 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RXRBP28702 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRBP28702 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RXRBP28702 SLC25A1P3-201ENST00000395415 828 ntBASIC21.08■□□□□ 0.97
RXRBP28702 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
RXRBP28702 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC21.08■□□□□ 0.97
RXRBP28702 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RXRBP28702 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC21.08■□□□□ 0.97
RXRBP28702 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC21.08■□□□□ 0.97
RXRBP28702 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RXRBP28702 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.08■□□□□ 0.96
RXRBP28702 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RXRBP28702 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RXRBP28702 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.07■□□□□ 0.96
RXRBP28702 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.07■□□□□ 0.96
RXRBP28702 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.07■□□□□ 0.96
RXRBP28702 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RXRBP28702 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 CD8B2-202ENST00000417670 633 ntBASIC21.07■□□□□ 0.96
RXRBP28702 AL590640.2-201ENST00000457038 527 ntBASIC21.07■□□□□ 0.96
RXRBP28702 RN7SL181P-201ENST00000462921 277 ntBASIC21.07■□□□□ 0.96
RXRBP28702 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.07■□□□□ 0.96
RXRBP28702 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.07■□□□□ 0.96
RXRBP28702 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC21.07■□□□□ 0.96
RXRBP28702 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RXRBP28702 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.07■□□□□ 0.96
RXRBP28702 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC21.07■□□□□ 0.96
RXRBP28702 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RXRBP28702 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.07■□□□□ 0.96
RXRBP28702 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC21.07■□□□□ 0.96
RXRBP28702 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RXRBP28702 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms