Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX1P22670 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX1P22670 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RFX1P22670 AL645728.2-201ENST00000641974 660 ntBASIC17.91■□□□□ 0.46
RFX1P22670 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RFX1P22670 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX1P22670 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RFX1P22670 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RFX1P22670 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RFX1P22670 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RFX1P22670 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX1P22670 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.9■□□□□ 0.46
RFX1P22670 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX1P22670 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RFX1P22670 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.9■□□□□ 0.46
RFX1P22670 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX1P22670 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RFX1P22670 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RFX1P22670 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RFX1P22670 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX1P22670 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFX1P22670 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.9■□□□□ 0.46
RFX1P22670 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 PMS2P4-201ENST00000412466 1052 ntBASIC17.9■□□□□ 0.46
RFX1P22670 IGLL3P-201ENST00000412472 434 ntBASIC17.9■□□□□ 0.46
RFX1P22670 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.9■□□□□ 0.46
RFX1P22670 RNA5SP421-201ENST00000516864 134 ntBASIC17.9■□□□□ 0.46
RFX1P22670 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RFX1P22670 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.9■□□□□ 0.46
RFX1P22670 AC021097.1-201ENST00000607902 574 ntBASIC17.9■□□□□ 0.46
RFX1P22670 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX1P22670 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX1P22670 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX1P22670 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX1P22670 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX1P22670 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RFX1P22670 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
RFX1P22670 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFX1P22670 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX1P22670 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFX1P22670 AC005052.1-201ENST00000625181 2492 ntBASIC17.89■□□□□ 0.45
RFX1P22670 AL662844.4-201ENST00000606367 2838 ntBASIC17.89■□□□□ 0.45
RFX1P22670 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX1P22670 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 AC005034.1-201ENST00000426657 489 ntBASIC17.89■□□□□ 0.45
RFX1P22670 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.89■□□□□ 0.45
RFX1P22670 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX1P22670 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX1P22670 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RFX1P22670 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX1P22670 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX1P22670 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX1P22670 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RFX1P22670 AC092364.2-201ENST00000596710 2692 ntBASIC17.89■□□□□ 0.45
RFX1P22670 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX1P22670 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX1P22670 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.88■□□□□ 0.45
RFX1P22670 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX1P22670 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX1P22670 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX1P22670 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX1P22670 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX1P22670 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RFX1P22670 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms