Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CAPN3P20807 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPN3P20807 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CAPN3P20807 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPN3P20807 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CAPN3P20807 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CAPN3P20807 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 LINC02447-202ENST00000501888 2146 ntBASIC15.88■□□□□ 0.13
CAPN3P20807 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CAPN3P20807 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.88■□□□□ 0.13
CAPN3P20807 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.88■□□□□ 0.13
CAPN3P20807 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPN3P20807 UPF3AP3-201ENST00000420996 769 ntBASIC15.88■□□□□ 0.13
CAPN3P20807 AC098831.1-202ENST00000438821 336 ntBASIC15.88■□□□□ 0.13
CAPN3P20807 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 AC087163.2-201ENST00000457299 853 ntBASIC15.88■□□□□ 0.13
CAPN3P20807 POU5F1P6-201ENST00000466990 990 ntBASIC15.88■□□□□ 0.13
CAPN3P20807 AC073648.2-201ENST00000510116 352 ntBASIC15.88■□□□□ 0.13
CAPN3P20807 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.88■□□□□ 0.13
CAPN3P20807 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.88■□□□□ 0.13
CAPN3P20807 AL022326.1-202ENST00000641533 845 ntBASIC15.88■□□□□ 0.13
CAPN3P20807 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPN3P20807 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPN3P20807 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.88■□□□□ 0.13
CAPN3P20807 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CAPN3P20807 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CAPN3P20807 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CAPN3P20807 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPN3P20807 AC131009.4-201ENST00000624048 1740 ntBASIC15.88■□□□□ 0.13
CAPN3P20807 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN3P20807 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CAPN3P20807 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN3P20807 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CAPN3P20807 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.87■□□□□ 0.13
CAPN3P20807 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 SLC22A20-204ENST00000530038 1673 ntBASIC15.87■□□□□ 0.13
CAPN3P20807 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN3P20807 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.87■□□□□ 0.13
CAPN3P20807 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.87■□□□□ 0.13
CAPN3P20807 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 SCARNA2-201ENST00000458748 420 ntBASIC15.87■□□□□ 0.13
CAPN3P20807 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN3P20807 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 MIR3687-2-201ENST00000577708 61 ntBASIC15.87■□□□□ 0.13
CAPN3P20807 MIR3687-1-201ENST00000614492 61 ntBASIC15.87■□□□□ 0.13
CAPN3P20807 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN3P20807 AC073347.1-201ENST00000421633 2643 ntBASIC15.87■□□□□ 0.13
CAPN3P20807 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CAPN3P20807 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN3P20807 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN3P20807 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CAPN3P20807 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CAPN3P20807 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN3P20807 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CAPN3P20807 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN3P20807 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CAPN3P20807 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN3P20807 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN3P20807 LINC01144-201ENST00000626198 1710 ntBASIC15.86■□□□□ 0.13
CAPN3P20807 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN3P20807 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN3P20807 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms