Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXD8P13378 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXD8P13378 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXD8P13378 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXD8P13378 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HOXD8P13378 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXD8P13378 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXD8P13378 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXD8P13378 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXD8P13378 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXD8P13378 AC123567.1-201ENST00000548294 1261 ntBASIC17.92■□□□□ 0.46
HOXD8P13378 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXD8P13378 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXD8P13378 RARRES2P5-201ENST00000564013 466 ntBASIC17.92■□□□□ 0.46
HOXD8P13378 AC132938.2-201ENST00000579188 680 ntBASIC17.92■□□□□ 0.46
HOXD8P13378 TMEM261P1-201ENST00000604899 340 ntBASIC17.92■□□□□ 0.46
HOXD8P13378 AL162274.1-201ENST00000617191 1098 ntBASIC17.92■□□□□ 0.46
HOXD8P13378 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXD8P13378 AL591163.1-201ENST00000641757 987 ntBASIC17.92■□□□□ 0.46
HOXD8P13378 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXD8P13378 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXD8P13378 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXD8P13378 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXD8P13378 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXD8P13378 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXD8P13378 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXD8P13378 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXD8P13378 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HOXD8P13378 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXD8P13378 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HOXD8P13378 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXD8P13378 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXD8P13378 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXD8P13378 RPL13P2-201ENST00000440687 659 ntBASIC17.91■□□□□ 0.46
HOXD8P13378 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXD8P13378 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
HOXD8P13378 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
HOXD8P13378 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXD8P13378 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXD8P13378 AL008721.1-201ENST00000609964 604 ntBASIC17.91■□□□□ 0.46
HOXD8P13378 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXD8P13378 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXD8P13378 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXD8P13378 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXD8P13378 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HOXD8P13378 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXD8P13378 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXD8P13378 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXD8P13378 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
HOXD8P13378 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HOXD8P13378 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXD8P13378 GPR53P-205ENST00000457298 1084 ntBASIC17.9■□□□□ 0.46
HOXD8P13378 RN7SL837P-201ENST00000463010 287 ntBASIC17.9■□□□□ 0.46
HOXD8P13378 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXD8P13378 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.9■□□□□ 0.46
HOXD8P13378 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HOXD8P13378 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXD8P13378 AC243562.2-201ENST00000561247 970 ntBASIC17.9■□□□□ 0.46
HOXD8P13378 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HOXD8P13378 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.9■□□□□ 0.46
HOXD8P13378 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXD8P13378 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.9■□□□□ 0.46
HOXD8P13378 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
HOXD8P13378 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HOXD8P13378 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXD8P13378 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HOXD8P13378 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXD8P13378 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXD8P13378 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXD8P13378 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HOXD8P13378 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
HOXD8P13378 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.89■□□□□ 0.46
HOXD8P13378 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
HOXD8P13378 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.89■□□□□ 0.46
HOXD8P13378 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
HOXD8P13378 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HOXD8P13378 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms