Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COL11A1P12107 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 BNIP3P1-202ENST00000550043 1585 ntBASIC18.38■□□□□ 0.53
COL11A1P12107 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.38■□□□□ 0.53
COL11A1P12107 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL11A1P12107 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 FLJ38576-201ENST00000623820 2459 ntBASIC18.38■□□□□ 0.53
COL11A1P12107 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.38■□□□□ 0.53
COL11A1P12107 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL11A1P12107 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 TOMM22P5-201ENST00000416399 439 ntBASIC18.37■□□□□ 0.53
COL11A1P12107 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.37■□□□□ 0.53
COL11A1P12107 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 AC234783.1-201ENST00000441761 496 ntBASIC18.37■□□□□ 0.53
COL11A1P12107 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.37■□□□□ 0.53
COL11A1P12107 MIR6805-201ENST00000615055 62 ntBASIC18.37■□□□□ 0.53
COL11A1P12107 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.37■□□□□ 0.53
COL11A1P12107 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.37■□□□□ 0.53
COL11A1P12107 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COL11A1P12107 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COL11A1P12107 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COL11A1P12107 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.37■□□□□ 0.53
COL11A1P12107 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.37■□□□□ 0.53
COL11A1P12107 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.37■□□□□ 0.53
COL11A1P12107 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.37■□□□□ 0.53
COL11A1P12107 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.37■□□□□ 0.53
COL11A1P12107 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.37■□□□□ 0.53
COL11A1P12107 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.37■□□□□ 0.53
COL11A1P12107 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.37■□□□□ 0.53
COL11A1P12107 MIR8072-201ENST00000614241 80 ntBASIC18.37■□□□□ 0.53
COL11A1P12107 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COL11A1P12107 AL033527.4-201ENST00000641026 673 ntBASIC18.37■□□□□ 0.53
COL11A1P12107 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL11A1P12107 ME2P1-201ENST00000426028 1970 ntBASIC18.37■□□□□ 0.53
COL11A1P12107 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COL11A1P12107 AC106820.2-201ENST00000563775 3264 ntBASIC18.36■□□□□ 0.53
COL11A1P12107 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
COL11A1P12107 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.36■□□□□ 0.53
COL11A1P12107 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.36■□□□□ 0.53
COL11A1P12107 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.36■□□□□ 0.53
COL11A1P12107 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.36■□□□□ 0.53
COL11A1P12107 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.36■□□□□ 0.53
COL11A1P12107 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.36■□□□□ 0.53
COL11A1P12107 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.36■□□□□ 0.53
COL11A1P12107 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.36■□□□□ 0.53
COL11A1P12107 RAB43P1-201ENST00000561790 589 ntBASIC18.36■□□□□ 0.53
COL11A1P12107 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.36■□□□□ 0.53
COL11A1P12107 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.36■□□□□ 0.53
COL11A1P12107 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL11A1P12107 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.36■□□□□ 0.53
COL11A1P12107 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
COL11A1P12107 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
COL11A1P12107 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL11A1P12107 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.36■□□□□ 0.53
COL11A1P12107 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
COL11A1P12107 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL11A1P12107 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL11A1P12107 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.35■□□□□ 0.53
COL11A1P12107 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 RPS2P32-201ENST00000439199 892 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 AC036164.1-201ENST00000570544 333 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.35■□□□□ 0.53
COL11A1P12107 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.35■□□□□ 0.53
COL11A1P12107 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.35■□□□□ 0.53
COL11A1P12107 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL11A1P12107 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms