Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.86■□□□□ 0.45
CCDC172P0C7W6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC172P0C7W6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.85■□□□□ 0.45
CCDC172P0C7W6 DUSP5P1-201ENST00000441325 1139 ntBASIC17.85■□□□□ 0.45
CCDC172P0C7W6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 TP73-AS1-207ENST00000624167 988 ntBASIC17.85■□□□□ 0.45
CCDC172P0C7W6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC172P0C7W6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AC012569.1-201ENST00000591191 1524 ntBASIC17.84■□□□□ 0.45
CCDC172P0C7W6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 KRT18P67-201ENST00000432816 1264 ntBASIC17.84■□□□□ 0.45
CCDC172P0C7W6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AC006449.6-201ENST00000612330 2296 ntBASIC17.84■□□□□ 0.45
CCDC172P0C7W6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 AL596087.1-201ENST00000400979 1969 ntBASIC17.84■□□□□ 0.45
CCDC172P0C7W6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC172P0C7W6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms