Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 BANF1P1-201ENST00000553684 263 ntBASIC14.92□□□□□ -0.02
FREM3P0C091 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.92□□□□□ -0.02
FREM3P0C091 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
FREM3P0C091 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.91□□□□□ -0.02
FREM3P0C091 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
FREM3P0C091 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.91□□□□□ -0.02
FREM3P0C091 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 TOP3BP1-201ENST00000420768 1380 ntBASIC14.91□□□□□ -0.02
FREM3P0C091 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FREM3P0C091 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FREM3P0C091 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.91□□□□□ -0.02
FREM3P0C091 AC026150.2-201ENST00000564693 1156 ntBASIC14.91□□□□□ -0.02
FREM3P0C091 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.91□□□□□ -0.02
FREM3P0C091 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
FREM3P0C091 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
FREM3P0C091 AP001350.2-201ENST00000625104 1094 ntBASIC14.91□□□□□ -0.02
FREM3P0C091 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.91□□□□□ -0.02
FREM3P0C091 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.91□□□□□ -0.02
FREM3P0C091 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.91□□□□□ -0.02
FREM3P0C091 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FREM3P0C091 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
FREM3P0C091 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FREM3P0C091 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FREM3P0C091 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
FREM3P0C091 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.9□□□□□ -0.02
FREM3P0C091 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.9□□□□□ -0.02
FREM3P0C091 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.9□□□□□ -0.02
FREM3P0C091 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
FREM3P0C091 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
FREM3P0C091 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.9□□□□□ -0.02
FREM3P0C091 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.9□□□□□ -0.02
FREM3P0C091 AL512652.2-201ENST00000625156 1716 ntBASIC14.9□□□□□ -0.02
FREM3P0C091 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
FREM3P0C091 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
FREM3P0C091 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
FREM3P0C091 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.9□□□□□ -0.02
FREM3P0C091 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.9□□□□□ -0.02
FREM3P0C091 AC069120.2-201ENST00000524091 540 ntBASIC14.9□□□□□ -0.02
FREM3P0C091 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.9□□□□□ -0.02
FREM3P0C091 KRT8P23-201ENST00000560090 1207 ntBASIC14.9□□□□□ -0.02
FREM3P0C091 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.9□□□□□ -0.02
FREM3P0C091 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.9□□□□□ -0.02
FREM3P0C091 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.9□□□□□ -0.02
FREM3P0C091 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FREM3P0C091 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 ALOX12P2-203ENST00000570921 1945 ntBASIC14.89□□□□□ -0.03
FREM3P0C091 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.89□□□□□ -0.03
FREM3P0C091 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
FREM3P0C091 GGT3P-204ENST00000453783 1664 ntBASIC14.89□□□□□ -0.03
FREM3P0C091 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.89□□□□□ -0.03
FREM3P0C091 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.89□□□□□ -0.03
FREM3P0C091 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
FREM3P0C091 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FREM3P0C091 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.89□□□□□ -0.03
FREM3P0C091 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.89□□□□□ -0.03
FREM3P0C091 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.89□□□□□ -0.03
FREM3P0C091 SPDYE7P-202ENST00000420373 878 ntBASIC14.89□□□□□ -0.03
FREM3P0C091 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FREM3P0C091 AC093724.1-201ENST00000448659 1027 ntBASIC14.89□□□□□ -0.03
FREM3P0C091 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
FREM3P0C091 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.89□□□□□ -0.03
FREM3P0C091 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.89□□□□□ -0.03
FREM3P0C091 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
FREM3P0C091 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.89□□□□□ -0.03
FREM3P0C091 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms