Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HOXC6P09630 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXC6P09630 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
HOXC6P09630 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXC6P09630 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HOXC6P09630 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXC6P09630 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
HOXC6P09630 FO393414.2-201ENST00000405153 598 ntBASIC18.41■□□□□ 0.54
HOXC6P09630 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXC6P09630 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXC6P09630 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXC6P09630 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.41■□□□□ 0.54
HOXC6P09630 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.41■□□□□ 0.54
HOXC6P09630 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.41■□□□□ 0.54
HOXC6P09630 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HOXC6P09630 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 AL031731.1-201ENST00000642131 2094 ntBASIC18.41■□□□□ 0.54
HOXC6P09630 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HOXC6P09630 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXC6P09630 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 AC060834.1-201ENST00000443027 2032 ntBASIC18.4■□□□□ 0.54
HOXC6P09630 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
HOXC6P09630 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 AL645728.1-201ENST00000366221 2101 ntBASIC18.4■□□□□ 0.54
HOXC6P09630 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HOXC6P09630 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HOXC6P09630 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXC6P09630 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HOXC6P09630 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXC6P09630 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 HIST3H2BA-201ENST00000436555 524 ntBASIC18.4■□□□□ 0.54
HOXC6P09630 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
HOXC6P09630 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
HOXC6P09630 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
HOXC6P09630 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
HOXC6P09630 RARRES2P5-201ENST00000564013 466 ntBASIC18.4■□□□□ 0.54
HOXC6P09630 COX11-210ENST00000639671 696 ntBASIC18.4■□□□□ 0.54
HOXC6P09630 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXC6P09630 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HOXC6P09630 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXC6P09630 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXC6P09630 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
HOXC6P09630 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HOXC6P09630 AC106820.2-201ENST00000563775 3264 ntBASIC18.4■□□□□ 0.54
HOXC6P09630 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HOXC6P09630 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.39■□□□□ 0.54
HOXC6P09630 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HOXC6P09630 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.39■□□□□ 0.53
HOXC6P09630 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HOXC6P09630 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HOXC6P09630 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.39■□□□□ 0.53
HOXC6P09630 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.39■□□□□ 0.53
HOXC6P09630 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXC6P09630 AC092658.1-201ENST00000505836 891 ntBASIC18.39■□□□□ 0.53
HOXC6P09630 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HOXC6P09630 AC015936.2-201ENST00000593177 259 ntBASIC18.39■□□□□ 0.53
HOXC6P09630 MIR8072-201ENST00000614241 80 ntBASIC18.39■□□□□ 0.53
HOXC6P09630 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HOXC6P09630 AL033527.4-201ENST00000641026 673 ntBASIC18.39■□□□□ 0.53
HOXC6P09630 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 GGT4P-201ENST00000623672 1708 ntBASIC18.39■□□□□ 0.53
HOXC6P09630 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.39■□□□□ 0.53
HOXC6P09630 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HOXC6P09630 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXC6P09630 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
HOXC6P09630 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.39■□□□□ 0.53
HOXC6P09630 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms