Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
THBS1P07996 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 PMS2P7-201ENST00000506558 1336 ntBASIC15.16■□□□□ 0.02
THBS1P07996 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THBS1P07996 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.15■□□□□ 0.02
THBS1P07996 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
THBS1P07996 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.15■□□□□ 0.02
THBS1P07996 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.15■□□□□ 0.02
THBS1P07996 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
THBS1P07996 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
THBS1P07996 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.15■□□□□ 0.02
THBS1P07996 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.15■□□□□ 0.02
THBS1P07996 PGAM5P1-201ENST00000518923 814 ntBASIC15.15■□□□□ 0.02
THBS1P07996 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.15■□□□□ 0.02
THBS1P07996 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.15■□□□□ 0.02
THBS1P07996 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.15■□□□□ 0.02
THBS1P07996 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
THBS1P07996 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.15■□□□□ 0.02
THBS1P07996 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
THBS1P07996 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
THBS1P07996 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
THBS1P07996 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS1P07996 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS1P07996 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.14■□□□□ 0.01
THBS1P07996 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS1P07996 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.14■□□□□ 0.01
THBS1P07996 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS1P07996 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS1P07996 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS1P07996 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.14■□□□□ 0.01
THBS1P07996 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS1P07996 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
THBS1P07996 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
THBS1P07996 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.14■□□□□ 0.01
THBS1P07996 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.14■□□□□ 0.01
THBS1P07996 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS1P07996 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.14■□□□□ 0.01
THBS1P07996 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS1P07996 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
THBS1P07996 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
THBS1P07996 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
THBS1P07996 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
THBS1P07996 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS1P07996 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.14■□□□□ 0.01
THBS1P07996 AC092919.2-201ENST00000623631 1645 ntBASIC15.14■□□□□ 0.01
THBS1P07996 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.13■□□□□ 0.01
THBS1P07996 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 ZNF259P1-201ENST00000407656 1365 ntBASIC15.13■□□□□ 0.01
THBS1P07996 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS1P07996 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms