Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.68■□□□□ 0.74
CHGBP05060 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHGBP05060 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHGBP05060 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.68■□□□□ 0.74
CHGBP05060 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.68■□□□□ 0.74
CHGBP05060 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.68■□□□□ 0.74
CHGBP05060 AC069262.1-201ENST00000539058 672 ntBASIC19.68■□□□□ 0.74
CHGBP05060 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.68■□□□□ 0.74
CHGBP05060 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.68■□□□□ 0.74
CHGBP05060 AC061975.2-201ENST00000581722 295 ntBASIC19.68■□□□□ 0.74
CHGBP05060 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.68■□□□□ 0.74
CHGBP05060 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CHGBP05060 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.67■□□□□ 0.74
CHGBP05060 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CHGBP05060 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHGBP05060 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.67■□□□□ 0.74
CHGBP05060 AC098859.1-201ENST00000502915 1238 ntBASIC19.67■□□□□ 0.74
CHGBP05060 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.67■□□□□ 0.74
CHGBP05060 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.67■□□□□ 0.74
CHGBP05060 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHGBP05060 MIR6080-201ENST00000617359 66 ntBASIC19.67■□□□□ 0.74
CHGBP05060 AC093512.1-201ENST00000617969 520 ntBASIC19.67■□□□□ 0.74
CHGBP05060 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.67■□□□□ 0.74
CHGBP05060 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
CHGBP05060 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.67■□□□□ 0.74
CHGBP05060 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.67■□□□□ 0.74
CHGBP05060 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.67■□□□□ 0.74
CHGBP05060 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.67■□□□□ 0.74
CHGBP05060 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHGBP05060 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.67■□□□□ 0.74
CHGBP05060 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHGBP05060 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
CHGBP05060 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 FAM220BP-201ENST00000377689 816 ntBASIC19.66■□□□□ 0.74
CHGBP05060 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.66■□□□□ 0.74
CHGBP05060 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.66■□□□□ 0.74
CHGBP05060 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.66■□□□□ 0.74
CHGBP05060 AL645939.2-201ENST00000427340 991 ntBASIC19.66■□□□□ 0.74
CHGBP05060 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
CHGBP05060 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.66■□□□□ 0.74
CHGBP05060 AL512356.2-201ENST00000546955 174 ntBASIC19.66■□□□□ 0.74
CHGBP05060 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.66■□□□□ 0.74
CHGBP05060 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.66■□□□□ 0.74
CHGBP05060 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.66■□□□□ 0.74
CHGBP05060 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.66■□□□□ 0.74
CHGBP05060 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.66■□□□□ 0.74
CHGBP05060 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.66■□□□□ 0.74
CHGBP05060 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.66■□□□□ 0.74
CHGBP05060 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 AL592424.1-201ENST00000563624 1536 ntBASIC19.66■□□□□ 0.74
CHGBP05060 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHGBP05060 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CHGBP05060 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.65■□□□□ 0.74
CHGBP05060 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHGBP05060 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHGBP05060 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.65■□□□□ 0.74
CHGBP05060 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.65■□□□□ 0.74
CHGBP05060 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHGBP05060 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CHGBP05060 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHGBP05060 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHGBP05060 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHGBP05060 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHGBP05060 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHGBP05060 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.65■□□□□ 0.74
CHGBP05060 CYMP-203ENST00000474680 1263 ntBASIC19.65■□□□□ 0.74
CHGBP05060 RNA5SP410-201ENST00000516285 106 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms