Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A1P02462 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 RARRES2P5-201ENST00000564013 466 ntBASIC19.78■□□□□ 0.76
COL4A1P02462 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.78■□□□□ 0.76
COL4A1P02462 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 MIR6775-201ENST00000617557 69 ntBASIC19.78■□□□□ 0.76
COL4A1P02462 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL4A1P02462 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.78■□□□□ 0.76
COL4A1P02462 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A1P02462 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.78■□□□□ 0.76
COL4A1P02462 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A1P02462 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A1P02462 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A1P02462 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A1P02462 HNRNPUP1-201ENST00000554987 333 ntBASIC19.78■□□□□ 0.76
COL4A1P02462 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A1P02462 RAB43P1-201ENST00000561790 589 ntBASIC19.78■□□□□ 0.76
COL4A1P02462 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL4A1P02462 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A1P02462 TMEM261P1-201ENST00000604899 340 ntBASIC19.78■□□□□ 0.76
COL4A1P02462 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.78■□□□□ 0.76
COL4A1P02462 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A1P02462 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A1P02462 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.77■□□□□ 0.76
COL4A1P02462 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A1P02462 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.77■□□□□ 0.76
COL4A1P02462 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.77■□□□□ 0.76
COL4A1P02462 KRT8P37-201ENST00000451609 1420 ntBASIC19.77■□□□□ 0.76
COL4A1P02462 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A1P02462 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A1P02462 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
COL4A1P02462 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A1P02462 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
COL4A1P02462 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL4A1P02462 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.77■□□□□ 0.76
COL4A1P02462 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.77■□□□□ 0.76
COL4A1P02462 AC022494.1-201ENST00000466044 728 ntBASIC19.77■□□□□ 0.76
COL4A1P02462 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.77■□□□□ 0.76
COL4A1P02462 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.77■□□□□ 0.76
COL4A1P02462 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.77■□□□□ 0.76
COL4A1P02462 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.77■□□□□ 0.76
COL4A1P02462 MIR5189-201ENST00000577370 114 ntBASIC19.77■□□□□ 0.76
COL4A1P02462 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.77■□□□□ 0.76
COL4A1P02462 MIR6805-201ENST00000615055 62 ntBASIC19.77■□□□□ 0.76
COL4A1P02462 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.77■□□□□ 0.76
COL4A1P02462 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.77■□□□□ 0.75
COL4A1P02462 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL4A1P02462 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
COL4A1P02462 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL4A1P02462 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.77■□□□□ 0.75
COL4A1P02462 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.76■□□□□ 0.75
COL4A1P02462 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.76■□□□□ 0.75
COL4A1P02462 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
COL4A1P02462 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.76■□□□□ 0.75
COL4A1P02462 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.76■□□□□ 0.75
COL4A1P02462 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.76■□□□□ 0.75
COL4A1P02462 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
COL4A1P02462 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL4A1P02462 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.76■□□□□ 0.75
COL4A1P02462 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A1P02462 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.76■□□□□ 0.75
COL4A1P02462 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.76■□□□□ 0.75
COL4A1P02462 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL4A1P02462 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A1P02462 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A1P02462 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms