Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDNEP1O95476 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.98■□□□□ 0.63
CTDNEP1O95476 FAM58CP-201ENST00000435741 640 ntBASIC18.98■□□□□ 0.63
CTDNEP1O95476 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.98■□□□□ 0.63
CTDNEP1O95476 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.98■□□□□ 0.63
CTDNEP1O95476 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDNEP1O95476 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.98■□□□□ 0.63
CTDNEP1O95476 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTDNEP1O95476 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.98■□□□□ 0.63
CTDNEP1O95476 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.98■□□□□ 0.63
CTDNEP1O95476 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDNEP1O95476 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTDNEP1O95476 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CTDNEP1O95476 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTDNEP1O95476 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.98■□□□□ 0.63
CTDNEP1O95476 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 AC243562.1-201ENST00000560672 389 ntBASIC18.97■□□□□ 0.63
CTDNEP1O95476 AL135744.1-201ENST00000565098 629 ntBASIC18.97■□□□□ 0.63
CTDNEP1O95476 AC040169.1-201ENST00000565382 521 ntBASIC18.97■□□□□ 0.63
CTDNEP1O95476 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 AP005117.1-202ENST00000581724 1908 ntBASIC18.97■□□□□ 0.63
CTDNEP1O95476 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTDNEP1O95476 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTDNEP1O95476 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 TFAMP1-201ENST00000412727 736 ntBASIC18.96■□□□□ 0.63
CTDNEP1O95476 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 GPX1P2-201ENST00000429271 606 ntBASIC18.96■□□□□ 0.63
CTDNEP1O95476 AL671277.1-201ENST00000429656 993 ntBASIC18.96■□□□□ 0.63
CTDNEP1O95476 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTDNEP1O95476 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.96■□□□□ 0.63
CTDNEP1O95476 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDNEP1O95476 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 AC004832.2-201ENST00000426397 482 ntBASIC18.95■□□□□ 0.62
CTDNEP1O95476 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 KRT8P48-201ENST00000515599 1220 ntBASIC18.95■□□□□ 0.62
CTDNEP1O95476 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.95■□□□□ 0.62
CTDNEP1O95476 LINC01225-203ENST00000563550 1244 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms