Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCA5O60264 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SMARCA5O60264 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SMARCA5O60264 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.27■□□□□ 0.84
SMARCA5O60264 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.27■□□□□ 0.84
SMARCA5O60264 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.27■□□□□ 0.84
SMARCA5O60264 AC112482.1-201ENST00000492080 688 ntBASIC20.27■□□□□ 0.84
SMARCA5O60264 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.27■□□□□ 0.84
SMARCA5O60264 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCA5O60264 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCA5O60264 AC243562.1-201ENST00000560672 389 ntBASIC20.27■□□□□ 0.84
SMARCA5O60264 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.27■□□□□ 0.84
SMARCA5O60264 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 MTDHP5-201ENST00000598980 586 ntBASIC20.27■□□□□ 0.84
SMARCA5O60264 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.27■□□□□ 0.84
SMARCA5O60264 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.27■□□□□ 0.84
SMARCA5O60264 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCA5O60264 AC010491.1-201ENST00000563101 2797 ntBASIC20.27■□□□□ 0.83
SMARCA5O60264 AC132872.4-202ENST00000622924 2756 ntBASIC20.27■□□□□ 0.83
SMARCA5O60264 FOXO1B-201ENST00000504678 1527 ntBASIC20.27■□□□□ 0.83
SMARCA5O60264 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.27■□□□□ 0.83
SMARCA5O60264 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SMARCA5O60264 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMARCA5O60264 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.27■□□□□ 0.83
SMARCA5O60264 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.27■□□□□ 0.83
SMARCA5O60264 AL139384.1-201ENST00000612143 3047 ntBASIC20.27■□□□□ 0.83
SMARCA5O60264 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.26■□□□□ 0.83
SMARCA5O60264 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMARCA5O60264 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.26■□□□□ 0.83
SMARCA5O60264 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
SMARCA5O60264 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
SMARCA5O60264 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
SMARCA5O60264 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.26■□□□□ 0.83
SMARCA5O60264 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.26■□□□□ 0.83
SMARCA5O60264 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SMARCA5O60264 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMARCA5O60264 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMARCA5O60264 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.26■□□□□ 0.83
SMARCA5O60264 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
SMARCA5O60264 AC024909.3-201ENST00000611513 2257 ntBASIC20.25■□□□□ 0.83
SMARCA5O60264 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCA5O60264 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
SMARCA5O60264 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCA5O60264 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.25■□□□□ 0.83
SMARCA5O60264 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.25■□□□□ 0.83
SMARCA5O60264 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.25■□□□□ 0.83
SMARCA5O60264 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.25■□□□□ 0.83
SMARCA5O60264 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.25■□□□□ 0.83
SMARCA5O60264 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SMARCA5O60264 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.25■□□□□ 0.83
SMARCA5O60264 AL592424.1-201ENST00000563624 1536 ntBASIC20.25■□□□□ 0.83
SMARCA5O60264 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 AL513523.2-202ENST00000427283 2040 ntBASIC20.25■□□□□ 0.83
SMARCA5O60264 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCA5O60264 CICP6-201ENST00000457191 2729 ntBASIC20.25■□□□□ 0.83
SMARCA5O60264 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
SMARCA5O60264 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCA5O60264 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SMARCA5O60264 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.24■□□□□ 0.83
SMARCA5O60264 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms