Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EXTL3O43909 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
EXTL3O43909 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EXTL3O43909 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
EXTL3O43909 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXTL3O43909 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
EXTL3O43909 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXTL3O43909 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.8■□□□□ 0.44
EXTL3O43909 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.8■□□□□ 0.44
EXTL3O43909 AC027612.4-201ENST00000605371 583 ntBASIC17.8■□□□□ 0.44
EXTL3O43909 AC009093.7-201ENST00000623853 1223 ntBASIC17.8■□□□□ 0.44
EXTL3O43909 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.8■□□□□ 0.44
EXTL3O43909 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EXTL3O43909 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.8■□□□□ 0.44
EXTL3O43909 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.8■□□□□ 0.44
EXTL3O43909 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.8■□□□□ 0.44
EXTL3O43909 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.8■□□□□ 0.44
EXTL3O43909 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.8■□□□□ 0.44
EXTL3O43909 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
EXTL3O43909 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXTL3O43909 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXTL3O43909 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.79■□□□□ 0.44
EXTL3O43909 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
EXTL3O43909 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EXTL3O43909 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.79■□□□□ 0.44
EXTL3O43909 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
EXTL3O43909 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.79■□□□□ 0.44
EXTL3O43909 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.79■□□□□ 0.44
EXTL3O43909 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.79■□□□□ 0.44
EXTL3O43909 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EXTL3O43909 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
EXTL3O43909 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.79■□□□□ 0.44
EXTL3O43909 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.79■□□□□ 0.44
EXTL3O43909 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.79■□□□□ 0.44
EXTL3O43909 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.79■□□□□ 0.44
EXTL3O43909 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 AC006449.6-201ENST00000612330 2296 ntBASIC17.79■□□□□ 0.44
EXTL3O43909 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
EXTL3O43909 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.79■□□□□ 0.44
EXTL3O43909 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.79■□□□□ 0.44
EXTL3O43909 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EXTL3O43909 MTHFR-217ENST00000641820 1569 ntBASIC17.79■□□□□ 0.44
EXTL3O43909 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
EXTL3O43909 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
EXTL3O43909 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.78■□□□□ 0.44
EXTL3O43909 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.78■□□□□ 0.44
EXTL3O43909 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
EXTL3O43909 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.78■□□□□ 0.44
EXTL3O43909 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 AC124067.4-201ENST00000519691 2379 ntBASIC17.78■□□□□ 0.44
EXTL3O43909 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.78■□□□□ 0.44
EXTL3O43909 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
EXTL3O43909 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 FAM220BP-201ENST00000377689 816 ntBASIC17.78■□□□□ 0.44
EXTL3O43909 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 GPS2P2-201ENST00000430745 888 ntBASIC17.78■□□□□ 0.44
EXTL3O43909 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.78■□□□□ 0.44
EXTL3O43909 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
EXTL3O43909 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
EXTL3O43909 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.78■□□□□ 0.44
EXTL3O43909 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.78■□□□□ 0.44
EXTL3O43909 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EXTL3O43909 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.78■□□□□ 0.44
EXTL3O43909 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
EXTL3O43909 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
EXTL3O43909 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
EXTL3O43909 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
EXTL3O43909 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EXTL3O43909 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms