Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 AL671277.1-201ENST00000429656 993 ntBASIC16.42■□□□□ 0.22
LDB2O43679 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 PRYP6-201ENST00000514804 343 ntBASIC16.42■□□□□ 0.22
LDB2O43679 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 AL138918.1-201ENST00000568306 659 ntBASIC16.42■□□□□ 0.22
LDB2O43679 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 C20orf181-201ENST00000623918 480 ntBASIC16.42■□□□□ 0.22
LDB2O43679 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.42■□□□□ 0.22
LDB2O43679 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.42■□□□□ 0.22
LDB2O43679 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LDB2O43679 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.42■□□□□ 0.22
LDB2O43679 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LDB2O43679 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.42■□□□□ 0.22
LDB2O43679 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LDB2O43679 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LDB2O43679 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.41■□□□□ 0.22
LDB2O43679 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LDB2O43679 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 YBX2P1-201ENST00000394192 760 ntBASIC16.41■□□□□ 0.22
LDB2O43679 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 TFAMP1-201ENST00000412727 736 ntBASIC16.41■□□□□ 0.22
LDB2O43679 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.41■□□□□ 0.22
LDB2O43679 AL135744.1-201ENST00000565098 629 ntBASIC16.41■□□□□ 0.22
LDB2O43679 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.41■□□□□ 0.22
LDB2O43679 MTDHP5-201ENST00000598980 586 ntBASIC16.41■□□□□ 0.22
LDB2O43679 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.41■□□□□ 0.22
LDB2O43679 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.41■□□□□ 0.22
LDB2O43679 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.41■□□□□ 0.22
LDB2O43679 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.41■□□□□ 0.22
LDB2O43679 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.41■□□□□ 0.22
LDB2O43679 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
LDB2O43679 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.41■□□□□ 0.22
LDB2O43679 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB2O43679 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
LDB2O43679 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.4■□□□□ 0.22
LDB2O43679 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.4■□□□□ 0.22
LDB2O43679 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.4■□□□□ 0.22
LDB2O43679 AC073389.1-201ENST00000595595 795 ntBASIC16.4■□□□□ 0.22
LDB2O43679 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.4■□□□□ 0.22
LDB2O43679 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.4■□□□□ 0.22
LDB2O43679 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
LDB2O43679 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.4■□□□□ 0.22
LDB2O43679 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.4■□□□□ 0.22
LDB2O43679 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms