Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 DUX4L17-201ENST00000557360 1267 ntBASIC15.74■□□□□ 0.11
PCDH17O14917 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.74■□□□□ 0.11
PCDH17O14917 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PCDH17O14917 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.74■□□□□ 0.11
PCDH17O14917 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDH17O14917 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDH17O14917 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDH17O14917 ALOX12P2-203ENST00000570921 1945 ntBASIC15.74■□□□□ 0.11
PCDH17O14917 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 AC132872.4-202ENST00000622924 2756 ntBASIC15.74■□□□□ 0.11
PCDH17O14917 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 AL513523.2-202ENST00000427283 2040 ntBASIC15.73■□□□□ 0.11
PCDH17O14917 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDH17O14917 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDH17O14917 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 AL355306.1-201ENST00000415580 579 ntBASIC15.73■□□□□ 0.11
PCDH17O14917 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDH17O14917 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDH17O14917 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDH17O14917 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDH17O14917 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDH17O14917 RFPL4AP1-201ENST00000530883 850 ntBASIC15.73■□□□□ 0.11
PCDH17O14917 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDH17O14917 RARRES2P8-201ENST00000566335 367 ntBASIC15.73■□□□□ 0.11
PCDH17O14917 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDH17O14917 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDH17O14917 AL009183.1-201ENST00000603760 355 ntBASIC15.73■□□□□ 0.11
PCDH17O14917 AC026120.1-201ENST00000611536 926 ntBASIC15.73■□□□□ 0.11
PCDH17O14917 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDH17O14917 AC105339.1-204ENST00000636249 355 ntBASIC15.73■□□□□ 0.11
PCDH17O14917 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDH17O14917 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDH17O14917 AC131009.4-201ENST00000624048 1740 ntBASIC15.73■□□□□ 0.11
PCDH17O14917 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDH17O14917 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDH17O14917 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDH17O14917 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDH17O14917 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDH17O14917 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH17O14917 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH17O14917 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH17O14917 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 AL671277.1-201ENST00000429656 993 ntBASIC15.72■□□□□ 0.11
PCDH17O14917 ADH5P3-201ENST00000433842 1137 ntBASIC15.72■□□□□ 0.11
PCDH17O14917 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH17O14917 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDH17O14917 CYMP-203ENST00000474680 1263 ntBASIC15.72■□□□□ 0.11
PCDH17O14917 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDH17O14917 AC021097.1-201ENST00000607902 574 ntBASIC15.72■□□□□ 0.11
PCDH17O14917 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
PCDH17O14917 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms