Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC25.96■■□□□ 1.75
CHD1O14646 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC25.96■■□□□ 1.75
CHD1O14646 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHD1O14646 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC25.96■■□□□ 1.75
CHD1O14646 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC25.96■■□□□ 1.75
CHD1O14646 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHD1O14646 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC25.95■■□□□ 1.75
CHD1O14646 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHD1O14646 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHD1O14646 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC25.95■■□□□ 1.74
CHD1O14646 AC234644.1-201ENST00000406065 370 ntBASIC25.95■■□□□ 1.74
CHD1O14646 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CHD1O14646 AC245100.5-201ENST00000452108 331 ntBASIC25.95■■□□□ 1.74
CHD1O14646 AC026410.3-201ENST00000514280 936 ntBASIC25.95■■□□□ 1.74
CHD1O14646 PTK2-225ENST00000520892 571 ntTSL 4 BASIC25.95■■□□□ 1.74
CHD1O14646 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC25.95■■□□□ 1.74
CHD1O14646 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC25.95■■□□□ 1.74
CHD1O14646 ECM1P1-201ENST00000604092 1279 ntBASIC25.95■■□□□ 1.74
CHD1O14646 CU633904.3-201ENST00000624042 1029 ntBASIC25.95■■□□□ 1.74
CHD1O14646 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHD1O14646 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHD1O14646 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHD1O14646 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CHD1O14646 U82695.1-201ENST00000635752 1889 ntBASIC25.94■■□□□ 1.74
CHD1O14646 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC25.94■■□□□ 1.74
CHD1O14646 ATP6V0CP2-201ENST00000469409 207 ntBASIC25.94■■□□□ 1.74
CHD1O14646 AC126915.1-201ENST00000522847 1038 ntBASIC25.94■■□□□ 1.74
CHD1O14646 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC25.94■■□□□ 1.74
CHD1O14646 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
CHD1O14646 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC25.94■■□□□ 1.74
CHD1O14646 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC25.94■■□□□ 1.74
CHD1O14646 AC091544.8-201ENST00000619490 361 ntBASIC25.94■■□□□ 1.74
CHD1O14646 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC25.94■■□□□ 1.74
CHD1O14646 AC006453.4-201ENST00000636949 1252 ntBASIC25.94■■□□□ 1.74
CHD1O14646 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC25.94■■□□□ 1.74
CHD1O14646 AC006480.2-201ENST00000609770 1337 ntBASIC25.94■■□□□ 1.74
CHD1O14646 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 FOS-202ENST00000535987 1402 ntTSL 2 BASIC25.94■■□□□ 1.74
CHD1O14646 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 PARVG-202ENST00000415224 999 ntTSL 2 BASIC25.94■■□□□ 1.74
CHD1O14646 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC25.94■■□□□ 1.74
CHD1O14646 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC25.94■■□□□ 1.74
CHD1O14646 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC25.94■■□□□ 1.74
CHD1O14646 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
CHD1O14646 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC25.94■■□□□ 1.74
CHD1O14646 AC005730.2-201ENST00000564549 1184 ntBASIC25.94■■□□□ 1.74
CHD1O14646 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHD1O14646 KSR1-207ENST00000578981 748 ntTSL 4 BASIC25.94■■□□□ 1.74
CHD1O14646 MIR6756-201ENST00000616240 63 ntBASIC25.94■■□□□ 1.74
CHD1O14646 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC25.93■■□□□ 1.74
CHD1O14646 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
CHD1O14646 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC25.93■■□□□ 1.74
CHD1O14646 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC25.93■■□□□ 1.74
CHD1O14646 KRT18P43-201ENST00000469825 1281 ntBASIC25.93■■□□□ 1.74
CHD1O14646 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC25.93■■□□□ 1.74
CHD1O14646 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC25.93■■□□□ 1.74
CHD1O14646 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC25.93■■□□□ 1.74
CHD1O14646 AC015910.1-201ENST00000579400 975 ntBASIC25.93■■□□□ 1.74
CHD1O14646 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC25.93■■□□□ 1.74
CHD1O14646 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
CHD1O14646 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 AL023775.1-201ENST00000454907 1746 ntBASIC25.93■■□□□ 1.74
CHD1O14646 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
CHD1O14646 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC25.93■■□□□ 1.74
CHD1O14646 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD1O14646 PCDHB17P-201ENST00000539533 2393 ntBASIC25.93■■□□□ 1.74
CHD1O14646 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC25.93■■□□□ 1.74
CHD1O14646 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC25.93■■□□□ 1.74
CHD1O14646 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHD1O14646 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC25.92■■□□□ 1.74
CHD1O14646 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC25.92■■□□□ 1.74
CHD1O14646 TISP43-201ENST00000409793 538 ntTSL 4 BASIC25.92■■□□□ 1.74
CHD1O14646 ACTG1P2-201ENST00000415776 1125 ntBASIC25.92■■□□□ 1.74
CHD1O14646 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC25.92■■□□□ 1.74
CHD1O14646 ACTG1P11-201ENST00000425411 1125 ntBASIC25.92■■□□□ 1.74
CHD1O14646 ELP6-209ENST00000446787 894 ntTSL 3 BASIC25.92■■□□□ 1.74
CHD1O14646 AP001582.1-201ENST00000525856 295 ntBASIC25.92■■□□□ 1.74
CHD1O14646 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC25.92■■□□□ 1.74
CHD1O14646 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC25.92■■□□□ 1.74
CHD1O14646 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC25.92■■□□□ 1.74
CHD1O14646 AC135050.7-201ENST00000624508 2218 ntBASIC25.92■■□□□ 1.74
CHD1O14646 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHD1O14646 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC25.92■■□□□ 1.74
CHD1O14646 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms