Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HCG4B-203ENST00000450128 991 ntBASIC15.62■□□□□ 0.09
UPK1AO00322 AC079776.4-201ENST00000511039 504 ntBASIC15.62■□□□□ 0.09
UPK1AO00322 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.62■□□□□ 0.09
UPK1AO00322 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.62■□□□□ 0.09
UPK1AO00322 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.62■□□□□ 0.09
UPK1AO00322 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
UPK1AO00322 AC012569.1-201ENST00000591191 1524 ntBASIC15.62■□□□□ 0.09
UPK1AO00322 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
UPK1AO00322 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1AO00322 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.61■□□□□ 0.09
UPK1AO00322 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 MIR4515-201ENST00000584082 81 ntBASIC15.61■□□□□ 0.09
UPK1AO00322 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.61■□□□□ 0.09
UPK1AO00322 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.61■□□□□ 0.09
UPK1AO00322 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UPK1AO00322 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.61■□□□□ 0.09
UPK1AO00322 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK1AO00322 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK1AO00322 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
UPK1AO00322 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.6■□□□□ 0.09
UPK1AO00322 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
UPK1AO00322 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.6■□□□□ 0.09
UPK1AO00322 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.6■□□□□ 0.09
UPK1AO00322 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.6■□□□□ 0.09
UPK1AO00322 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.6■□□□□ 0.09
UPK1AO00322 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 AC145285.3-201ENST00000564603 959 ntBASIC15.6■□□□□ 0.09
UPK1AO00322 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.6■□□□□ 0.09
UPK1AO00322 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.6■□□□□ 0.09
UPK1AO00322 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK1AO00322 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
UPK1AO00322 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK1AO00322 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.6■□□□□ 0.09
UPK1AO00322 AC104109.2-201ENST00000602919 1418 ntBASIC15.6■□□□□ 0.09
UPK1AO00322 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
UPK1AO00322 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK1AO00322 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK1AO00322 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
UPK1AO00322 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK1AO00322 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
UPK1AO00322 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
UPK1AO00322 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms