Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TLR4O00206 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TLR4O00206 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.2
TLR4O00206 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TLR4O00206 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TLR4O00206 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TLR4O00206 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.27■□□□□ 0.2
TLR4O00206 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TLR4O00206 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TLR4O00206 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TLR4O00206 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.27■□□□□ 0.2
TLR4O00206 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.27■□□□□ 0.2
TLR4O00206 PIN1P1-201ENST00000412108 996 ntBASIC16.27■□□□□ 0.2
TLR4O00206 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.27■□□□□ 0.2
TLR4O00206 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.27■□□□□ 0.2
TLR4O00206 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TLR4O00206 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.27■□□□□ 0.2
TLR4O00206 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.27■□□□□ 0.2
TLR4O00206 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
TLR4O00206 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.27■□□□□ 0.2
TLR4O00206 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TLR4O00206 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TLR4O00206 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.27■□□□□ 0.19
TLR4O00206 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.27■□□□□ 0.19
TLR4O00206 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.27■□□□□ 0.19
TLR4O00206 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TLR4O00206 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
TLR4O00206 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TLR4O00206 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.26■□□□□ 0.19
TLR4O00206 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TLR4O00206 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.26■□□□□ 0.19
TLR4O00206 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.26■□□□□ 0.19
TLR4O00206 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.26■□□□□ 0.19
TLR4O00206 GAPDHP21-201ENST00000450301 1010 ntBASIC16.26■□□□□ 0.19
TLR4O00206 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.26■□□□□ 0.19
TLR4O00206 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.26■□□□□ 0.19
TLR4O00206 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TLR4O00206 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.26■□□□□ 0.19
TLR4O00206 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.26■□□□□ 0.19
TLR4O00206 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TLR4O00206 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 AC092068.3-201ENST00000587894 2016 ntBASIC16.25■□□□□ 0.19
TLR4O00206 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TLR4O00206 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TLR4O00206 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TLR4O00206 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.25■□□□□ 0.19
TLR4O00206 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.25■□□□□ 0.19
TLR4O00206 MTND6P24-201ENST00000440466 518 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms