Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.12□□□□□ -0.47
NACAE9PAV3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.12□□□□□ -0.47
NACAE9PAV3 SPDYE21P-201ENST00000413323 827 ntBASIC12.12□□□□□ -0.47
NACAE9PAV3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
NACAE9PAV3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.12□□□□□ -0.47
NACAE9PAV3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NACAE9PAV3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
NACAE9PAV3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.11□□□□□ -0.47
NACAE9PAV3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.11□□□□□ -0.47
NACAE9PAV3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NACAE9PAV3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NACAE9PAV3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NACAE9PAV3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.11□□□□□ -0.47
NACAE9PAV3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.11□□□□□ -0.47
NACAE9PAV3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.11□□□□□ -0.47
NACAE9PAV3 AC007967.2-201ENST00000432613 625 ntBASIC12.11□□□□□ -0.47
NACAE9PAV3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.11□□□□□ -0.47
NACAE9PAV3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
NACAE9PAV3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NACAE9PAV3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NACAE9PAV3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 GPALPP1-207ENST00000611650 899 ntBASIC12.11□□□□□ -0.47
NACAE9PAV3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.11□□□□□ -0.47
NACAE9PAV3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.11□□□□□ -0.47
NACAE9PAV3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
NACAE9PAV3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NACAE9PAV3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
NACAE9PAV3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 MTHFR-217ENST00000641820 1569 ntBASIC12.11□□□□□ -0.47
NACAE9PAV3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NACAE9PAV3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.11□□□□□ -0.47
NACAE9PAV3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NACAE9PAV3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.11□□□□□ -0.47
NACAE9PAV3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NACAE9PAV3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.1□□□□□ -0.47
NACAE9PAV3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.1□□□□□ -0.47
NACAE9PAV3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.1□□□□□ -0.47
NACAE9PAV3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms