Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 FGFR3P6-201ENST00000457012 610 ntBASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 AP001350.2-201ENST00000625104 1094 ntBASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 AC068418.2-201ENST00000577309 3703 ntBASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 AC020765.3-201ENST00000613051 740 ntBASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM49D1C9J1S8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM49D1C9J1S8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM49D1C9J1S8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM49D1C9J1S8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.52■□□□□ 0.23
TRIM49D1C9J1S8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM49D1C9J1S8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM49D1C9J1S8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
TRIM49D1C9J1S8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM49D1C9J1S8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM49D1C9J1S8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 MIR648-201ENST00000385046 94 ntBASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 AC005412.3-201ENST00000580309 715 ntBASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 AC093458.2-201ENST00000623150 629 ntBASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 AC023824.1-201ENST00000562945 2975 ntBASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM49D1C9J1S8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM49D1C9J1S8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms