Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRBV4S1A1TA0A5B7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ALOX12P2-203ENST00000570921 1945 ntBASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ACTG1P14-201ENST00000446382 1122 ntBASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC068137.2-201ENST00000605408 478 ntBASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 KRT18P28-201ENST00000453838 1332 ntBASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC006538.1-201ENST00000567905 1585 ntBASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DUX4L17-201ENST00000557360 1267 ntBASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AL513477.1-201ENST00000602865 2407 ntBASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms